TXNIP中tet2介导的5-羟甲基胞嘧啶促进全身性间变性大细胞淋巴瘤的细胞周期阻滞。

IF 4.8 2区 医学 Q1 GENETICS & HEREDITY Clinical Epigenetics Pub Date : 2025-01-21 DOI:10.1186/s13148-025-01816-0
Ziqing Yu, Lihua Zhong, Wangyang Tang, Wenfang Zhang, Ting Lin, Weifeng Zhu, Gang Chen, Jianchao Wang
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引用次数: 0

摘要

背景:5-羟甲基胞嘧啶(5-Hydroxymethylcytosine, 5hmC)修饰是DNA中一种重要的表观遗传修饰,在与各种类型癌症相关的一系列生物学过程中起着关键作用。5hmC在全身性间变性大细胞淋巴瘤(ALCL)中的作用尚未被彻底研究。本研究旨在探讨5hmC在ALCL进展中的作用。方法:取46例ALCL患者经福尔马林固定石蜡包埋(FFPE)肿瘤组织。使用GEO数据集分析5hmc相关酶的表达。免疫组化检测FFPE样品中5hmC和TET2水平。以alk阳性细胞株Su-DHL-1和alk阴性细胞株DL-40作为体外实验模型。通过rna测序和hmedip测序研究TET2在细胞周期调控中的潜在功能。结果:我们的研究发现ALCL患者的5hmC水平降低,这与TET2表达呈正相关。下调TET2导致ALCL细胞系5hmC水平降低,促进细胞周期的进展。hMeDIP-seq和随后的功能分析表明,硫氧还蛋白相互作用蛋白(TXNIP)参与了ALCL细胞的调节。进一步的机制研究显示5hmC水平影响TXNIP的表达。结论:我们的研究强调了5hmC和TET2在ALCL细胞周期进程调节中的关键作用。针对5hmC修饰或TET2的治疗策略可能为ALCL的治疗提供一种新的方法。
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TET2-mediated 5-hydroxymethylcytosine of TXNIP promotes cell cycle arrest in systemic anaplastic large cell lymphoma.

Background: 5-Hydroxymethylcytosine (5hmC) modification represents a significant epigenetic modification within DNA, playing a pivotal role in a range of biological processes associated with various types of cancer. The role of 5hmC in systemic anaplastic large cell lymphoma (ALCL) has not been thoroughly investigated. This study aims to examine the function of 5hmC in the advancement of ALCL.

Methods: Formalin-fixed, paraffin-embedded (FFPE) tumor tissues (n = 46) were obtained from ALCL patients. GEO dataset was used to analyze the expression 5hmC-relative enzymes. Immunohistochemistry was conducted to assess the level of 5hmC and Ten-eleven translocation 2 (TET2) on FFPE samples. The ALK-positive cell line, Su-DHL-1, and the ALK-negative cell line, DL-40, were utilized as in vitro experimental models. RNA-sequencing and hMeDIP-sequencing assays were performed to explore the potential functions of TET2 in cell cycle regulation.

Results: Our study identified a reduction of 5hmC levels in patients with ALCL, which exhibited a positive correlation with TET2 expression. Downregulation TET2 resulted in decreased 5hmC levels and facilitated the progression of the cell cycle in ALCL cell lines. hMeDIP-seq and subsequent functional analyses demonstrated the involvement of thioredoxin interacting protein (TXNIP) in the regulation of ALCL cells. Further mechanistic studies revealed that 5hmC levels influenced TXNIP expression.

Conclusions: Our study underscores the pivotal roles of 5hmC and TET2 in the regulation of cell cycle progression in ALCL. Therapeutic strategies aimed at targeting 5hmC modification or TET2 may offer a novel approach for the management of ALCL.

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来源期刊
自引率
5.30%
发文量
150
期刊介绍: Clinical Epigenetics, the official journal of the Clinical Epigenetics Society, is an open access, peer-reviewed journal that encompasses all aspects of epigenetic principles and mechanisms in relation to human disease, diagnosis and therapy. Clinical trials and research in disease model organisms are particularly welcome.
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