来自生长、生理和RNA-Seq转录组分析的证据表明,不同地区克氏针虫的干旱适应和响应存在差异。

IF 2.3 2区 生物学 Q2 ECOLOGY Ecology and Evolution Pub Date : 2025-01-21 DOI:10.1002/ece3.70870
Ziqing Gong, Zehang Qu, Yulin Liu, Tao Wang, Baijie Fan, Anzhi Ren, Yubao Gao, Nianxi Zhao
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引用次数: 0

摘要

在全球气候变化的背景下,探索不同地区植物对干旱的适应和响应是了解和预测其地理分布的关键。为探讨欧亚半干旱草原优势种的干旱适应与响应及其在生长、生理和RNA-seq转录组上的差异,本研究以克氏针茅(Stipa krylovii)为研究材料,进行了种子源(东、中、西部3个地区)×土壤水分处理(对照、轻旱、重旱3个处理)双因素试验。(1)西部地区个体的4项生长性状显著低于其他两个地区。通过京都基因与基因组百科全书(KEGG)对各处理个体基因表达的功能富集分析,发现了在严重干旱条件下独特的富集途径。(2)随着干旱程度的增加,西部地区个体分蘖数的减少幅度明显低于其他两个地区。东部、中部和西部地区个体的差异表达基因(DEGs)分别为4887、1900和4896。KEGG功能富集分析表明,东部和中部个体主要调控能量代谢和其他氨基酸代谢;西部地区主要调控其他次生代谢物的生物合成和碳水化合物代谢。(3)基于基因表达的聚类分析将相同干旱处理下西部地区与其他两个地区区分开来。研究结果表明,不同地区的克氏木本植物对干旱的适应和响应存在差异,特别是西部地区和其他两个地区的个体之间存在差异。这些发现对了解这一重要物种种群的适应性进化和种质资源保护具有重要意义。
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Drought Adaptation and Responses of Stipa krylovii Vary Among Different Regions: Evidence From Growth, Physiology, and RNA-Seq Transcriptome Analysis

In the context of global climate change, exploring how plant adaptation and responses to drought vary among different regions are crucial to understanding and predicting its geographic distribution. In this study, to explore the drought adaptation and responses of the dominant species in the semi-arid Eurasian Steppes and their differences among the different regions in terms of growth, physiology, and RNA-seq transcriptome, Stipa krylovii was chosen as the study material, and a seed source (three regions: eastern, middle, and western regions) × soil moisture treatment (three treatments: control, light drought, and heavy drought) two-factor experiment was conducted. (1) Four growth traits for individuals from the western region were significantly lower than those from the other two regions. By Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analysis on gene expressions of individuals from each treatment, unique enriched pathways were found under heavy drought. (2) The decrease in the number of tillers with the increasing drought was much lower for individuals from the western region than those from the other two regions. The differentially expressed genes (DEGs) of individuals from the eastern, middle, and western regions between heavy drought versus control were 4887, 1900, and 4896. By KEGG functional enrichment analysis, individuals from the eastern and middle regions mainly regulated energy metabolism and metabolism of other amino acids; and those from the western region mainly regulated biosynthesis of other secondary metabolites and carbohydrate metabolism. (3) Clustering analysis based on gene expressions separated the western region from the other two regions under the same drought treatment. This study indicates that drought adaptation and responses of S. krylovii vary among different regions, especially between individuals from the western region and the other two regions. These findings are essential to understanding the adaptive evolution of population and germplasm resource protection for this important species.

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来源期刊
CiteScore
4.40
自引率
3.80%
发文量
1027
审稿时长
3-6 weeks
期刊介绍: Ecology and Evolution is the peer reviewed journal for rapid dissemination of research in all areas of ecology, evolution and conservation science. The journal gives priority to quality research reports, theoretical or empirical, that develop our understanding of organisms and their diversity, interactions between them, and the natural environment. Ecology and Evolution gives prompt and equal consideration to papers reporting theoretical, experimental, applied and descriptive work in terrestrial and aquatic environments. The journal will consider submissions across taxa in areas including but not limited to micro and macro ecological and evolutionary processes, characteristics of and interactions between individuals, populations, communities and the environment, physiological responses to environmental change, population genetics and phylogenetics, relatedness and kin selection, life histories, systematics and taxonomy, conservation genetics, extinction, speciation, adaption, behaviour, biodiversity, species abundance, macroecology, population and ecosystem dynamics, and conservation policy.
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