Wenni He , Xiaoting Rong , Hui Lv , Lihua Zhang , Jinglin Bai , Lu Wang , Liyan Yu , Lixin Zhang , Tao Zhang
{"title":"转基因激活策略促进了巴西青霉倍半萜衍生代谢物的发现。","authors":"Wenni He , Xiaoting Rong , Hui Lv , Lihua Zhang , Jinglin Bai , Lu Wang , Liyan Yu , Lixin Zhang , Tao Zhang","doi":"10.1016/j.synbio.2024.12.006","DOIUrl":null,"url":null,"abstract":"<div><div>Genome mining has revealed that <em>Penicillium</em> spp. possess numerous down-regulated or cryptic biosynthetic gene clusters (BGCs). This finding hinted that our investigation of fungal secondary metabolomes is limited. Herein, we report a genetically-modified activation strategy to characterize the spectrum of sesquiterpenoids produced by <em>Penicillium brasilianum</em> CGMCC 3.4402. The cryptic or down-regulated pathways were stimulated by constitutive expression of pathway-specific regulator gene <em>berA</em> responsible for berkeleyacetals biosynthesis from <em>Neosartorya glabra</em>. Chemical analysis of the extracts from the mutant strain <em>Pb</em>-OE:<em>berA</em> enabled the isolation of two new compounds including one bisabolene-type arpenibisabolane C (<strong>1</strong>), one daucane-type arpenicarotane C (<strong>4</strong>), along with four known sesquiterpenoids including arpenibisabolane A (<strong>2</strong>), eupenicisirenins A (<strong>3</strong>), arpenicarotane B (<strong>5</strong>) and aspterric acid (<strong>6</strong>). The assignments of their structures were elucidated from detailed analyses of spectroscopic data, electronic circular dichroism calculation, and biogenetic considerations. The bioassay of isolated compounds (<strong>1</strong>–<strong>6</strong>) exhibited no cytotoxic activities against three tumor cells including MCF-7, HepG2, and A549. Arpenibisabolane C (<strong>1</strong>) and A (<strong>2</strong>) showed weak inhibition bioactivities on aquatic pathogens <em>Vibrio owensii</em> and <em>Vibrio algivorus</em>. Moreover, phylogenetic analysis and sequence alignments of crucial sesquiterpene synthases were performed. Based on the chemical structures and biogenetic investigations, a hypothetic pathway of new compounds (<strong>1</strong>, <strong>4</strong>) was proposed.</div></div>","PeriodicalId":22148,"journal":{"name":"Synthetic and Systems Biotechnology","volume":"10 2","pages":"Pages 391-400"},"PeriodicalIF":4.4000,"publicationDate":"2024-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11745945/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genetically-modified activation strategy facilitates the discovery of sesquiterpene-derived metabolites from Penicillium brasilianum\",\"authors\":\"Wenni He , Xiaoting Rong , Hui Lv , Lihua Zhang , Jinglin Bai , Lu Wang , Liyan Yu , Lixin Zhang , Tao Zhang\",\"doi\":\"10.1016/j.synbio.2024.12.006\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Genome mining has revealed that <em>Penicillium</em> spp. possess numerous down-regulated or cryptic biosynthetic gene clusters (BGCs). This finding hinted that our investigation of fungal secondary metabolomes is limited. Herein, we report a genetically-modified activation strategy to characterize the spectrum of sesquiterpenoids produced by <em>Penicillium brasilianum</em> CGMCC 3.4402. The cryptic or down-regulated pathways were stimulated by constitutive expression of pathway-specific regulator gene <em>berA</em> responsible for berkeleyacetals biosynthesis from <em>Neosartorya glabra</em>. Chemical analysis of the extracts from the mutant strain <em>Pb</em>-OE:<em>berA</em> enabled the isolation of two new compounds including one bisabolene-type arpenibisabolane C (<strong>1</strong>), one daucane-type arpenicarotane C (<strong>4</strong>), along with four known sesquiterpenoids including arpenibisabolane A (<strong>2</strong>), eupenicisirenins A (<strong>3</strong>), arpenicarotane B (<strong>5</strong>) and aspterric acid (<strong>6</strong>). The assignments of their structures were elucidated from detailed analyses of spectroscopic data, electronic circular dichroism calculation, and biogenetic considerations. The bioassay of isolated compounds (<strong>1</strong>–<strong>6</strong>) exhibited no cytotoxic activities against three tumor cells including MCF-7, HepG2, and A549. Arpenibisabolane C (<strong>1</strong>) and A (<strong>2</strong>) showed weak inhibition bioactivities on aquatic pathogens <em>Vibrio owensii</em> and <em>Vibrio algivorus</em>. Moreover, phylogenetic analysis and sequence alignments of crucial sesquiterpene synthases were performed. Based on the chemical structures and biogenetic investigations, a hypothetic pathway of new compounds (<strong>1</strong>, <strong>4</strong>) was proposed.</div></div>\",\"PeriodicalId\":22148,\"journal\":{\"name\":\"Synthetic and Systems Biotechnology\",\"volume\":\"10 2\",\"pages\":\"Pages 391-400\"},\"PeriodicalIF\":4.4000,\"publicationDate\":\"2024-12-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11745945/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Synthetic and Systems Biotechnology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2405805X24001583\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Synthetic and Systems Biotechnology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405805X24001583","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Genetically-modified activation strategy facilitates the discovery of sesquiterpene-derived metabolites from Penicillium brasilianum
Genome mining has revealed that Penicillium spp. possess numerous down-regulated or cryptic biosynthetic gene clusters (BGCs). This finding hinted that our investigation of fungal secondary metabolomes is limited. Herein, we report a genetically-modified activation strategy to characterize the spectrum of sesquiterpenoids produced by Penicillium brasilianum CGMCC 3.4402. The cryptic or down-regulated pathways were stimulated by constitutive expression of pathway-specific regulator gene berA responsible for berkeleyacetals biosynthesis from Neosartorya glabra. Chemical analysis of the extracts from the mutant strain Pb-OE:berA enabled the isolation of two new compounds including one bisabolene-type arpenibisabolane C (1), one daucane-type arpenicarotane C (4), along with four known sesquiterpenoids including arpenibisabolane A (2), eupenicisirenins A (3), arpenicarotane B (5) and aspterric acid (6). The assignments of their structures were elucidated from detailed analyses of spectroscopic data, electronic circular dichroism calculation, and biogenetic considerations. The bioassay of isolated compounds (1–6) exhibited no cytotoxic activities against three tumor cells including MCF-7, HepG2, and A549. Arpenibisabolane C (1) and A (2) showed weak inhibition bioactivities on aquatic pathogens Vibrio owensii and Vibrio algivorus. Moreover, phylogenetic analysis and sequence alignments of crucial sesquiterpene synthases were performed. Based on the chemical structures and biogenetic investigations, a hypothetic pathway of new compounds (1, 4) was proposed.
期刊介绍:
Synthetic and Systems Biotechnology aims to promote the communication of original research in synthetic and systems biology, with strong emphasis on applications towards biotechnology. This journal is a quarterly peer-reviewed journal led by Editor-in-Chief Lixin Zhang. The journal publishes high-quality research; focusing on integrative approaches to enable the understanding and design of biological systems, and research to develop the application of systems and synthetic biology to natural systems. This journal will publish Articles, Short notes, Methods, Mini Reviews, Commentary and Conference reviews.