José Ednésio da Cruz Freire, André Nogueira Cardeal Dos Santos, Andrelina Noronha Coelho de Souza, Ariclécio Cunha de Oliveira, Roberto Nicolete, Bruno Lopes de Sousa, João Hermínio Martins da Silva, Yuri de Abreu Gomes Vasconcelos, Isaac Neto Goes da Silva, Paula Matias Soares, Maria Izabel Florindo Guedes, Vânia Marilande Ceccatto
{"title":"基于免疫信息学方法的嵌合糖基水解酶18的分子和免疫学特性:一种新型抗利什曼原虫疫苗的设计","authors":"José Ednésio da Cruz Freire, André Nogueira Cardeal Dos Santos, Andrelina Noronha Coelho de Souza, Ariclécio Cunha de Oliveira, Roberto Nicolete, Bruno Lopes de Sousa, João Hermínio Martins da Silva, Yuri de Abreu Gomes Vasconcelos, Isaac Neto Goes da Silva, Paula Matias Soares, Maria Izabel Florindo Guedes, Vânia Marilande Ceccatto","doi":"10.1021/acsptsci.4c00341","DOIUrl":null,"url":null,"abstract":"<p><p>Leishmaniasis is a chronic inflammatory zoonotic illness caused by protozoan flagellates belonging to the <i>Leishmania</i> genus. Current data suggest that over 1 billion people worldwide are susceptible to infection, primarily in tropical and subtropical countries, where up to 2 million new cases are reported annually. Therefore, the development of a vaccine is crucial to combating this disease. This study employed immunoinformatics approaches to design a multiepitope anti-<i>Leishmania</i> vaccine, GH<sub>18</sub>-cp<i>Leish</i>, based on a cluster of six glycosyl hydrolases 18. We identified six helper T lymphocyte (HTL) epitopes and twenty-six cytotoxic T lymphocyte (CTL) epitopes with IC<sub>50</sub> values <50 nM, indicating high affinity. Additionally, we also identified 20 continuous and twenty-six discontinuous B-cell epitopes. Analysis for allergenicity and toxicity showed no potential to induce these phenomena. All data obtained from in silico tools suggest that physicochemical and biological studies indicate that the GH<sub>18</sub>-cp<i>Leish</i> chimeric protein is a promising candidate for an anti-<i>Leishmania</i> vaccine. Docking analysis showed that the Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>1</sub>, Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>2</sub>, Pep<sub>1</sub>-cp<i>Leish</i>::/TLR<sub>3</sub>, and Pep<sub>1</sub>-cp<i>Leish</i>::/TLR<sub>4</sub> complexes maintained a stable form. The best interaction cluster score was observed in the complex Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>2</sub> (center = -622.6 and lowest energy = -841.7 kcal.mol<sup>-1</sup>) followed by the complexes Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>4</sub> (center = -590.3 and lowest energy = -590.3 kcal.mol<sup>-1</sup>), Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>3</sub> (center = -589.1 and lowest energy = -657.0 kcal.mol<sup>-1</sup>), and Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>1</sub> (center = -504.1 and lowest energy = -602.9 kcal.mol<sup>-1</sup>), respectively. This study suggests that GH<sub>18</sub>-cp<i>Leish</i> may be suitable for constructing second-generation anti-<i>Leishmania</i> and even third-generation vaccines, given that its gene sequence is optimized for this purpose.</p>","PeriodicalId":36426,"journal":{"name":"ACS Pharmacology and Translational Science","volume":"8 1","pages":"78-96"},"PeriodicalIF":4.9000,"publicationDate":"2024-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11729430/pdf/","citationCount":"0","resultStr":"{\"title\":\"Molecular and Immunological Properties of a Chimeric Glycosyl Hydrolase 18 Based on Immunoinformatics Approaches: A Design of a New Anti-<i>Leishmania</i> Vaccine.\",\"authors\":\"José Ednésio da Cruz Freire, André Nogueira Cardeal Dos Santos, Andrelina Noronha Coelho de Souza, Ariclécio Cunha de Oliveira, Roberto Nicolete, Bruno Lopes de Sousa, João Hermínio Martins da Silva, Yuri de Abreu Gomes Vasconcelos, Isaac Neto Goes da Silva, Paula Matias Soares, Maria Izabel Florindo Guedes, Vânia Marilande Ceccatto\",\"doi\":\"10.1021/acsptsci.4c00341\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Leishmaniasis is a chronic inflammatory zoonotic illness caused by protozoan flagellates belonging to the <i>Leishmania</i> genus. Current data suggest that over 1 billion people worldwide are susceptible to infection, primarily in tropical and subtropical countries, where up to 2 million new cases are reported annually. Therefore, the development of a vaccine is crucial to combating this disease. This study employed immunoinformatics approaches to design a multiepitope anti-<i>Leishmania</i> vaccine, GH<sub>18</sub>-cp<i>Leish</i>, based on a cluster of six glycosyl hydrolases 18. We identified six helper T lymphocyte (HTL) epitopes and twenty-six cytotoxic T lymphocyte (CTL) epitopes with IC<sub>50</sub> values <50 nM, indicating high affinity. Additionally, we also identified 20 continuous and twenty-six discontinuous B-cell epitopes. Analysis for allergenicity and toxicity showed no potential to induce these phenomena. All data obtained from in silico tools suggest that physicochemical and biological studies indicate that the GH<sub>18</sub>-cp<i>Leish</i> chimeric protein is a promising candidate for an anti-<i>Leishmania</i> vaccine. Docking analysis showed that the Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>1</sub>, Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>2</sub>, Pep<sub>1</sub>-cp<i>Leish</i>::/TLR<sub>3</sub>, and Pep<sub>1</sub>-cp<i>Leish</i>::/TLR<sub>4</sub> complexes maintained a stable form. The best interaction cluster score was observed in the complex Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>2</sub> (center = -622.6 and lowest energy = -841.7 kcal.mol<sup>-1</sup>) followed by the complexes Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>4</sub> (center = -590.3 and lowest energy = -590.3 kcal.mol<sup>-1</sup>), Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>3</sub> (center = -589.1 and lowest energy = -657.0 kcal.mol<sup>-1</sup>), and Pep<sub>1</sub>-cp<i>Leish</i>::TLR<sub>1</sub> (center = -504.1 and lowest energy = -602.9 kcal.mol<sup>-1</sup>), respectively. This study suggests that GH<sub>18</sub>-cp<i>Leish</i> may be suitable for constructing second-generation anti-<i>Leishmania</i> and even third-generation vaccines, given that its gene sequence is optimized for this purpose.</p>\",\"PeriodicalId\":36426,\"journal\":{\"name\":\"ACS Pharmacology and Translational Science\",\"volume\":\"8 1\",\"pages\":\"78-96\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2024-12-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11729430/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Pharmacology and Translational Science\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1021/acsptsci.4c00341\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/10 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MEDICINAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Pharmacology and Translational Science","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1021/acsptsci.4c00341","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/10 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
Molecular and Immunological Properties of a Chimeric Glycosyl Hydrolase 18 Based on Immunoinformatics Approaches: A Design of a New Anti-Leishmania Vaccine.
Leishmaniasis is a chronic inflammatory zoonotic illness caused by protozoan flagellates belonging to the Leishmania genus. Current data suggest that over 1 billion people worldwide are susceptible to infection, primarily in tropical and subtropical countries, where up to 2 million new cases are reported annually. Therefore, the development of a vaccine is crucial to combating this disease. This study employed immunoinformatics approaches to design a multiepitope anti-Leishmania vaccine, GH18-cpLeish, based on a cluster of six glycosyl hydrolases 18. We identified six helper T lymphocyte (HTL) epitopes and twenty-six cytotoxic T lymphocyte (CTL) epitopes with IC50 values <50 nM, indicating high affinity. Additionally, we also identified 20 continuous and twenty-six discontinuous B-cell epitopes. Analysis for allergenicity and toxicity showed no potential to induce these phenomena. All data obtained from in silico tools suggest that physicochemical and biological studies indicate that the GH18-cpLeish chimeric protein is a promising candidate for an anti-Leishmania vaccine. Docking analysis showed that the Pep1-cpLeish::TLR1, Pep1-cpLeish::TLR2, Pep1-cpLeish::/TLR3, and Pep1-cpLeish::/TLR4 complexes maintained a stable form. The best interaction cluster score was observed in the complex Pep1-cpLeish::TLR2 (center = -622.6 and lowest energy = -841.7 kcal.mol-1) followed by the complexes Pep1-cpLeish::TLR4 (center = -590.3 and lowest energy = -590.3 kcal.mol-1), Pep1-cpLeish::TLR3 (center = -589.1 and lowest energy = -657.0 kcal.mol-1), and Pep1-cpLeish::TLR1 (center = -504.1 and lowest energy = -602.9 kcal.mol-1), respectively. This study suggests that GH18-cpLeish may be suitable for constructing second-generation anti-Leishmania and even third-generation vaccines, given that its gene sequence is optimized for this purpose.
期刊介绍:
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