小腹足动物物种的合并为巨足总纲(腹足纲:拟腹足纲)的系统发育提供了新的见解。

IF 2.2 2区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Comparative Biochemistry and Physiology D-Genomics & Proteomics Pub Date : 2025-01-11 DOI:10.1016/j.cbd.2025.101420
Jihang Gong , Xiao Han , Lu Qi , Lingfeng Kong , Qi Li
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引用次数: 0

摘要

原足纲是腹足纲中最丰富、最多样化的类群,是海洋生态学和系统分类学研究的主要热点之一。形态学和分子学研究都试图解决trocho总科的系统发育框架;然而,一些谱系之间的系统发育关系仍然存在争议。为了探索巨齿鳄属的系统发育关系,我们对9种巨齿鳄的线粒体基因组进行了测序,并利用38个线粒体基因组和27个转录组数据进行了分析,这些数据代表了巨齿鳄属11个科。所有Trochidae的线粒体基因组表现出一致的基因排列,基因组大小和核苷酸组成保守;而蚁科和蚁科则表现出较高的基因重排水平。此外,柱头蝇科的cox1基因和phasianellae科的nad4L基因有3个核苷酸插入,而Trochidae科的nad4基因有3个核苷酸缺失。最大似然分析和贝叶斯推理分析均支持除Tegulidae外所有trocho总科的单系性,并将Liotiidae定位为trocho总科的姊妹科,支持度较差至中等。沙蚕科被恢复为包括沙蚕科和沙蚕科的一个分支的姐妹群。这些发现挑战了基于形态学和分子数据的传统分类。本研究为巨足总纲的系统发育,特别是小软体动物分类群的纳入提供了新的认识,并强调了将小腹足类分类群纳入腹足亚群分子系统发育重建的意义。
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Incorporation of microgastropoda species provides novel insights into phylogeny of Trochoidea (Gastropoda: Vetigastropoda)
Trochoidea is the richest and most diverse group within Vetigastropoda, serving as one of the main focuses on studies of marine ecology and systematics. Both morphological and molecular studies have sought to resolve the phylogenetic framework of Trochoidea; however, the phylogenetic relationships among some lineages remain controversial. In order to explore the phylogenetic relationships within Trochoidea, we sequenced the mitochondrial genomes of 9 trochoids and analyzed them with data from 38 previously published mitochondrial genomes and 27 transcriptomic data representing 11 families within this group. The mitochondrial genomes of all Trochidae exhibited a consistent gene arrangement and showed conserved genome size and nucleotide composition; however, Colloniidae and Phasianellidae showed higher levels of gene order rearrangement. Furthermore, three-nucleotide insertions were observed in the cox1 gene of Colloniidae and nad4L gene of Phasianellidae, while three-nucleotide deletions were detected in nad4 gene of Trochidae. Both maximum likelihood and Bayesian inference analyses supported the monophyly of all families within the Trochoidea, except Tegulidae, and placed Liotiidae as sister to the rest of Trochoidea with poor to moderate support. Areneidae was recovered as the sister group to a clade including Phasianellidae and Colloniidae. These findings challenge the traditional classification of this family based on both morphological and molecular data. Our study provides new insights into the phylogeny of Trochoidea, especially with the incorporation of micromolluscs taxa, and highlight the significance of incorporating microgastropoda taxa into molecular phylogenetic reconstructions of gastropod subgroups.
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来源期刊
CiteScore
5.10
自引率
3.30%
发文量
69
审稿时长
33 days
期刊介绍: Comparative Biochemistry & Physiology (CBP) publishes papers in comparative, environmental and evolutionary physiology. Part D: Genomics and Proteomics (CBPD), focuses on “omics” approaches to physiology, including comparative and functional genomics, metagenomics, transcriptomics, proteomics, metabolomics, and lipidomics. Most studies employ “omics” and/or system biology to test specific hypotheses about molecular and biochemical mechanisms underlying physiological responses to the environment. We encourage papers that address fundamental questions in comparative physiology and biochemistry rather than studies with a focus that is purely technical, methodological or descriptive in nature.
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