利用线粒体16S rRNA和COI序列对西藏地区长角革螨的遗传多样性进行鉴定和分析。

IF 1.4 Q3 PARASITOLOGY Veterinary parasitology, regional studies and reports Pub Date : 2025-01-01 Epub Date: 2024-12-02 DOI:10.1016/j.vprsr.2024.101180
Xialing Zhao, Lamu Danqu, Bin Shi, Wenqiang Tang, Zengqiang Liu, Chenyang Xia
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引用次数: 0

摘要

蜱是多种病原体的载体和宿主,包括原生动物、细菌和病毒,这些病原体会在人类和牲畜中引起蜱传疾病。尽管分布广泛,但对其遗传多样性和种群结构的研究尚不深入。本研究利用显微镜对4个县的羊蜱进行了鉴定,并对西藏省长斑革蜱种群进行了线粒体16S rRNA和细胞色素氧化酶亚基1 (COI)基因序列的遗传分析。其16S rRNA基因序列分析显示9个单倍型和7个核苷酸变异,平均单倍型多样性(Hd)为0.505,平均核苷酸多样性(Pi)为0.00129。同样,COI序列显示28个单倍型,26个核苷酸变异,平均Hd为0.828,平均Pi为0.00279。分子方差分析(AMOVA)表明,大多数遗传变异发生在群体内。此外,中性试验分析还表明,黄花田鼠种群中存在潜在的瓶颈事件。单倍型网络呈星形分布,常见的单倍型有A1、A2、B1和B5。系统发育树将两个基因的单倍型划分为单倍型网络的两个分支,表明没有明显的地理聚类。本研究首次揭示了四种居群间的遗传分化,这可能与寄主的迁移有关。这种深入的遗传变异和群体结构的研究,为深入了解西藏地区紫花苜蓿的群体遗传学现状提供了有价值的见解。
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Identification and analysis of the genetic diversity of Dermacentor everestianus using mitochondrial 16S rRNA and COI sequences in the Xizang Autonomous Region of China
Ticks serve as vectors and reservoirs for a variety of pathogens, including protozoa, bacteria, and viruses, that cause tick-borne diseases in both humans and livestock. Despite their widespread distribution, their genetic diversity and population structure in Xizang have not been thoroughly investigated. In this study, sheep ticks were identified from four counties by microscopy, followed by genetic analysis of Dermacentor everestianus populations in Xizang based on mitochondrial 16S rRNA and cytochrome oxidase subunit 1 (COI) gene sequences. D. everestianus was the predominant species and 16S rRNA gene sequence analysis revealed nine haplotypes with seven nucleotide variations, showing a mean haplotype diversity (Hd) of 0.505 and mean nucleotide diversity (Pi) of 0.00129. Similarly, the COI sequences revealed 28 haplotypes with 26 nucleotide variations, yielding a mean Hd of 0.828 and a mean Pi of 0.00279. Molecular variance analysis (AMOVA) indicated that most genetic variation occurs within populations. In addition, neutral test analyses suggested potential bottleneck events in the D. everestianus populations. The haplotype network had a star-like distribution with the common haplotypes A1, A2, B1, and B5. The phylogenetic tree separated haplotypes of both genes into two branches on the haplotype network indicating no distinct geographical clustering. This study is the first to highlight the prevalence of D. everestianus in Xizang, revealing moderate genetic differentiation among the four populations, possibly due to host mobility. This intensive investigation of genetic variation and population structure contributes valuable insights into the current population genetics of D. everestianus in Xizang, China.
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来源期刊
CiteScore
2.90
自引率
7.10%
发文量
126
审稿时长
97 days
期刊介绍: Veterinary Parasitology: Regional Studies and Reports focuses on aspects of veterinary parasitology that are of regional concern, which is especially important in this era of climate change and the rapid and often unconstrained travel of people and animals. Relative to regions, this journal will accept papers of the highest quality dealing with all aspects of disease prevention, pathology, treatment, epidemiology, and control of parasites within the field of veterinary medicine. Also, case reports will be considered as they add to information related to local disease and its control; such papers must be concise and represent appropriate medical intervention. Papers on veterinary parasitology from wildlife species are acceptable, but only if they relate to the practice of veterinary medicine. Studies on vector-borne bacterial and viral agents are suitable, but only if the paper deals with vector transmission of these organisms to domesticated animals. Studies dealing with parasite control by means of natural products, both in vivo and in vitro, are more suited for one of the many journals that now specialize in papers of this type. However, due to the regional nature of much of this research, submissions may be considered based upon a case being made by the author(s) to the Editor. Circumstances relating to animal experimentation must meet the International Guiding Principles for Biomedical Research Involving Animals as issued by the Council for International Organizations of Medical Sciences (obtainable from: Executive Secretary C.I.O.M.S., c/o W.H.O., Via Appia, CH-1211 Geneva 27, Switzerland).
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