氧化锌纳米颗粒处理盐胁迫番茄植株转录组数据集。

IF 1.9 Q3 MULTIDISCIPLINARY SCIENCES Data in Brief Pub Date : 2025-02-01 Epub Date: 2025-01-09 DOI:10.1016/j.dib.2025.111282
Mostafa Ahmed , Zoltán Tóth , Diaa Attia Marrez , Roquia Rizk , Donia Abdul-Hamid , Kincső Decsi
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引用次数: 0

摘要

盐碱化降低了农业生产力和质量,在世界范围内造成整体经济损失。氧化锌纳米颗粒(ZnO-NPs)已被发现可以促进植物的生理和代谢过程,并提高对非生物胁迫的整体恢复能力。本研究评估了在存在和不存在NaCl胁迫源的情况下,化学生产的ZnO-NPs叶面施用对番茄植株的影响。数据集是通过利用浅mRNA测序技术获得的。SRA的6个数据集被上传到NCBI。上述数据集包括转录组霰弹枪组装(TSA),经过预处理数据集的爆炸,制图和注释的组态,以及来自RNA-seq reads量化的计数表。上述所有数据都包含在Mendeley数据库中。展望未来,数据库的利用将有助于在基因表达水平上检查植物生化反应中的修饰。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Transcriptome datasets of salt-stressed tomato plants treated with zinc oxide nanoparticles
Salinity diminishes agricultural productivity and quality, resulting in overall economic losses on a worldwide scale. Zinc oxide nanoparticles (ZnONPs) have been found to enhance plant physiological and metabolic processes, as well as increase overall resilience to abiotic stressors. A research study was undertaken to assess the effects of foliar application of chemically produced ZnONPs on tomato plants, both in the presence and absence of a NaCl stressor. The datasets were obtained through the utilization of the shallow mRNA sequencing technology. Six datasets from the SRA were uploaded to NCBI. The aforementioned datasets encompass the Transcriptome Shotgun Assembly (TSA), the contigs that underwent blasting, mapping, and annotation from the pre-processed datasets, and the count table derived from the quantification of RNA-seq reads. All the aforementioned data is encompassed under the Mendeley database. Moving forward, the utilization of databases will facilitate the examination of modifications in plant biochemical reactions at the level of gene expression.
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来源期刊
Data in Brief
Data in Brief MULTIDISCIPLINARY SCIENCES-
CiteScore
3.10
自引率
0.00%
发文量
996
审稿时长
70 days
期刊介绍: Data in Brief provides a way for researchers to easily share and reuse each other''s datasets by publishing data articles that: -Thoroughly describe your data, facilitating reproducibility. -Make your data, which is often buried in supplementary material, easier to find. -Increase traffic towards associated research articles and data, leading to more citations. -Open up doors for new collaborations. Because you never know what data will be useful to someone else, Data in Brief welcomes submissions that describe data from all research areas.
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