反应中心球形红杆菌分离四聚体模型内的电荷转移过程。

IF 2.9 2区 化学 Q3 CHEMISTRY, PHYSICAL The Journal of Physical Chemistry B Pub Date : 2025-03-20 Epub Date: 2025-03-10 DOI:10.1021/acs.jpcb.4c08094
Fehime Hayal Geçit, Hüseyin Aksu
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引用次数: 0

摘要

在过去的二十年中,结构分辨率和光谱表征的进步大大提高了我们对光合作用的理解。然而,光系统(PS)超配合物的复杂性仍然存在挑战。在球形红杆菌反应中心(RSRC)中,电荷分离过程从特殊对(P)的电荷转移(CT)步骤开始,细菌叶绿素a (BChl)的二聚体作为供体,并继续通过活性色素进行电子传递。我们的计算研究探讨了RSRC中的CT整流。我们发现,与B支相比,A支的CT速率更快,这可以归因于P附近颜料的取向以及周围蛋白质复合物对介电常数的影响。计算出的速率常数使用费米黄金法则推导,采用第一原理方法,在极化连续体模型(SRSH-PCM)中采用优化调谐的筛选范围分离混合函数。
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Charge-Transfer Processes within the Isolated Tetramer Models of the Reaction Center Rhodobacter sphaeroides.

Over the last two decades, advancements in structural resolution and spectral characterization have significantly enhanced our understanding of photosynthesis. However, the complexity of photosystem (PS) supercomplexes still presents challenges. In the Rhodobacter sphaeroides reaction center (RSRC), the charge separation process begins with a charge-transfer (CT) step at the special pair (P), a dimer of bacteriochlorophyll a (BChl), which acts as the donor, and continues with electron transport through the active pigments. Our computational study explores CT rectification in RSRC. We find that the CT rate is faster in the A branch compared with the B branch, which can be attributed to the orientation of the pigments near P and the influence of the surrounding protein complex on the dielectric constant. The calculated rate constants are derived using Fermi's golden rule, with a first-principles approach that employs an optimally tuned screened range-separated hybrid functional within a polarizable continuum model (SRSH-PCM).

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来源期刊
CiteScore
5.80
自引率
9.10%
发文量
965
审稿时长
1.6 months
期刊介绍: An essential criterion for acceptance of research articles in the journal is that they provide new physical insight. Please refer to the New Physical Insights virtual issue on what constitutes new physical insight. Manuscripts that are essentially reporting data or applications of data are, in general, not suitable for publication in JPC B.
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