工作流中的公平原则:用于可重复和可复制研究的GIScience工作流管理系统

Tao Hu , Taiping Liu , Venkat Sai Divyacharan Jarugumalli , Samuel Cheng , Chengbin Deng
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引用次数: 0

摘要

科学工作流程管理系统(WfMS)提供了一种系统化的方法来简化科学研究中的必要流程。科学界对FAIR(可查找、可访问、可互操作和可重用)工作流的需求正在增加,特别是在GIScience,其中数据不仅仅是输出,而是迭代高级过程的组成部分。传统的WfMS往往缺乏确保地理空间数据和过程透明度的能力,导致研究结果的可再现性和可复制性面临挑战。本文提出了面向FAIR的GIScience WfMS的概念和发展,旨在将FAIR原则融入到地理空间数据处理和分析的整个生命周期中。为了增强工作流的可查找性和可访问性,WfMS利用Harvard Dataverse来共享所有与工作流相关的数字资源,这些资源被组织成工作流数据集、节点和案例研究。每个资源都被分配了一个唯一的DOI(数字对象标识符),以确保易于访问和发现。更重要的是,WfMS遵循通用工作流语言(CWL)标准,以保证工作流的互操作性和可再现性。它还可以集成各种工具和软件,支持需要多个处理步骤的复杂分析。本文展示了GIScience WfMS的原型,并举例说明了两个地理空间科学案例,反映了它在不同数据集和研究目标选择适当技术方面的灵活性。用户友好的工作流设计器使具有不同技术专业水平的用户可以访问它,从而促进可重用、可再现和可复制的GIScience研究。
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FAIR principles in workflows: A GIScience workflow management system for reproducible and replicable studies
Scientific workflow management systems (WfMS) provide a systematic way to streamline necessary processes in scientific research. The demand for FAIR (Findable, Accessible, Interoperable, and Reusable) workflows is increasing in the scientific community, particularly in GIScience, where data is not just an output but an integral part of iterative advanced processes. Traditional WfMS often lack the capability to ensure geospatial data and process transparency, leading to challenges in reproducibility and replicability of research findings. This paper proposes the conceptualization and development of FAIR-oriented GIScience WfMS, aiming to incorporate the FAIR principles into the entire lifecycle of geospatial data processing and analysis. To enhance the findability and accessibility of workflows, the WfMS utilizes Harvard Dataverse to share all workflow-related digital resources, organized into workflow datasets, nodes, and case studies. Each resource is assigned a unique DOI (Digital Object Identifier), ensuring easy access and discovery. More importantly, the WfMS complies with the Common Workflow Language (CWL) standard to guarantee interoperability and reproducibility of workflows. It also enables the integration of diverse tools and software, supporting complex analyses that require multiple processing steps. This paper demonstrates the prototype of the GIScience WfMS and illustrates two geospatial science case studies, reflecting its flexibility in selecting appropriate techniques for various datasets and research goals. The user-friendly workflow designer makes it accessible to users with different levels of technical expertise, promoting reusable, reproducible, and replicable GIScience studies.
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来源期刊
International journal of applied earth observation and geoinformation : ITC journal
International journal of applied earth observation and geoinformation : ITC journal Global and Planetary Change, Management, Monitoring, Policy and Law, Earth-Surface Processes, Computers in Earth Sciences
CiteScore
12.00
自引率
0.00%
发文量
0
审稿时长
77 days
期刊介绍: The International Journal of Applied Earth Observation and Geoinformation publishes original papers that utilize earth observation data for natural resource and environmental inventory and management. These data primarily originate from remote sensing platforms, including satellites and aircraft, supplemented by surface and subsurface measurements. Addressing natural resources such as forests, agricultural land, soils, and water, as well as environmental concerns like biodiversity, land degradation, and hazards, the journal explores conceptual and data-driven approaches. It covers geoinformation themes like capturing, databasing, visualization, interpretation, data quality, and spatial uncertainty.
期刊最新文献
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