去泛素酶USP20对泛癌预后及免疫的综合分析

IF 4.2 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY The FASEB Journal Pub Date : 2025-04-24 DOI:10.1096/fj.202402603R
Ting Wang, Yibing Bai, Yi Dong, Jiapei Qin, Xin Zhou, An Wang, Dong Liu, Xiaoyan Li, Zhiqiang Ma, Yi Hu
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引用次数: 0

摘要

USP20是泛素-蛋白酶体系统中的一种去泛素酶,在肿瘤的发生和发展中起作用。然而,USP20表达与临床预后和肿瘤免疫的关系尚不清楚。本研究通过癌症基因组图谱(TCGA)、基因型-组织表达(GTEx)、肿瘤细胞系百科(CCLE)、STRING、基因表达谱交互分析(GEPIA2)、肿瘤微环境(TME)、免疫相关基因、肿瘤突变负担(TMB)、微卫星不稳定性(MSI)、同源重组缺陷(同源重组缺陷)、肿瘤干细胞性和相关信号通路研究USP20的表达及其与潜在预后价值、肿瘤微环境(TME)、免疫相关基因的关系。以及人类蛋白质图谱(HPA)。此外,我们还探讨了USP20在乳腺癌中的致癌能力。通过GraphPad Prism和R包进行数据分析。结果表明,USP20在大多数肿瘤中表达上调,并与17种肿瘤类型的生存相关。此外,USP20的表达与免疫浸润和免疫调节基因的表达密切相关。我们还验证了USP20表达与肿瘤异质性、肿瘤干性以及相应的信号通路之间的相关性。此外,我们的工作揭示了USP20在乳腺癌患者中高表达并预测了不良预后。基础实验证实,USP20过表达促进了乳腺癌细胞的增殖和迁移。本研究全面研究了USP20的表达及其与临床预后评估和肿瘤免疫调节的相关性,提示USP20可能作为与预后和癌症免疫治疗相关的生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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A comprehensive analysis of deubiquitinase USP20 on prognosis and immunity in pan-cancer

USP20 is a deubiquitinase enzyme in the ubiquitin–proteasome system that plays a role in the development and progression of tumors. However, the relationships between USP20 expression and clinical prognosis and tumor immunity remain unclear. In this study, the USP20 expression and its relationships with potential prognostic value, the tumor microenvironment (TME), immune-related genes, the tumor mutational burden (TMB), microsatellite instability (MSI), homologous recombination deficiency, cancer stemness, and correlated signaling pathways were investigated via The Cancer Genome Atlas (TCGA), Genotype-Tissue Expression (GTEx), Cancer Cell Line Encyclopedia (CCLE), STRING, Gene Expression Profiling Interactive Analysis (GEPIA2), and the Human Protein Atlas (HPA). Moreover, we explored the oncogenic capability of USP20 in breast cancer. Data analysis was performed via GraphPad Prism and the R package. The results indicated that the expression of USP20 was upregulated in most cancers and was associated with survival in 17 tumor types. Furthermore, USP20 expression was strongly correlated with immune infiltration and the expression of immunomodulatory genes. We also verified the correlations between USP20 expression and tumor heterogeneity, cancer stemness, and the corresponding signaling pathways. Moreover, our work revealed that USP20 was highly expressed and predicted a poor outcome in patients with breast cancer. Basic experiments verified that USP20 overexpression promoted both the proliferation and migration of breast cancer cells. This study comprehensively investigated the expression of USP20 and its correlation with clinical prognostic assessment and tumor immune modulation across cancers, indicating that USP20 might have utility as a biomarker associated with prognosis and cancer immunotherapy.

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来源期刊
The FASEB Journal
The FASEB Journal 生物-生化与分子生物学
CiteScore
9.20
自引率
2.10%
发文量
6243
审稿时长
3 months
期刊介绍: The FASEB Journal publishes international, transdisciplinary research covering all fields of biology at every level of organization: atomic, molecular, cell, tissue, organ, organismic and population. While the journal strives to include research that cuts across the biological sciences, it also considers submissions that lie within one field, but may have implications for other fields as well. The journal seeks to publish basic and translational research, but also welcomes reports of pre-clinical and early clinical research. In addition to research, review, and hypothesis submissions, The FASEB Journal also seeks perspectives, commentaries, book reviews, and similar content related to the life sciences in its Up Front section.
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