足月和早产孕妇宫颈阴道液的定量蛋白质组学分析

IF 2.1 3区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Proteome Science Pub Date : 2021-02-15 DOI:10.1186/s12953-021-00171-1
Young Eun Kim, Kwonseong Kim, Han Bin Oh, Sung Ki Lee, Dukjin Kang
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引用次数: 10

摘要

背景:早产(PTB)是围产期死亡和新生儿发病的主要原因之一,但对其复杂病因的了解仍然有限。在这里,我们介绍了自然早产或足月分娩的孕妇的宫颈阴道液(CVF)蛋白谱,旨在鉴定PTB和足月分娩中CVF蛋白的差异表达。方法:采用等压标签相对绝对定量法(iTRAQ)结合二维纳米流液相色谱-串联质谱法(2D-nLC-MS/MS)对早产和足月分娩妇女的CVF蛋白质组进行分析。我们使用合并对照CVF (n = 20)作为峰值标准,比较了PTB (n = 5)和对照组(n = 7)的CVF蛋白质组。结果:共鉴定到1294个CVF蛋白,其中605个为新鉴定蛋白。在PTB和足月分娩中定量的990个蛋白中,与足月分娩相比,PTB中有52个蛋白显著上调/下调。差异表达蛋白在功能上与免疫应答、内肽酶抑制剂和细胞骨架的结构成分相关。最后,我们通过Western blot证实了PTB中SERPINB7(一种丝氨酸型蛋白酶抑制剂)的下调。结论:综上所述,我们的研究提供了最终早产和足月分娩的孕妇的CVF蛋白质组定量图谱。这些有希望的结果有助于提高对PTB病因的理解,并发现无症状PTB的生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Quantitative proteomic profiling of Cervicovaginal fluid from pregnant women with term and preterm birth.

Background: Preterm birth (PTB) is one of major causes of perinatal mortality and neonatal morbidity, but knowledge of its complex etiology is still limited. Here we present cervicovaginal fluid (CVF) protein profiles of pregnant women who subsequently delivered at spontaneous preterm or term, aiming to identify differentially expressed CVF proteins in PTB and term birth.

Methods: The CVF proteome of women who sequentially delivered at preterm and term was analyzed using isobaric tags for relative and absolute quantitation (iTRAQ) coupled with two-dimensional nanoflow liquid chromatography-tandem mass spectrometry (2D-nLC-MS/MS). We compared the CVF proteome of PTB (n = 5) and control subjects (term birth, n = 7) using pooled control CVF (term birth, n = 20) as spike-in standard.

Results: We identified 1294 CVF proteins, of which 605 were newly identified proteins. Of 990 proteins quantified in both PTB and term birth, 52 proteins were significantly up/down-regulated in PTB compared to term birth. The differentially expressed proteins were functionally associated to immune response, endopeptidase inhibitors and structural constituent of cytoskeleton. Finally, we confirm the down-regulation of SERPINB7 (a serine-type protease inhibitor) in PTB compared to control by Western blot.

Conclusions: Taken together, our study provide quantitative CVF proteome profiles of pregnant women who ultimately delivered at preterm and term. These promising results could help to improve the understanding of PTB etiology and to discover biomarkers for asymptomatic PTB.

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来源期刊
Proteome Science
Proteome Science 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
17
审稿时长
4.5 months
期刊介绍: Proteome Science is an open access journal publishing research in the area of systems studies. Proteome Science considers manuscripts based on all aspects of functional and structural proteomics, genomics, metabolomics, systems analysis and metabiome analysis. It encourages the submissions of studies that use large-scale or systems analysis of biomolecules in a cellular, organismal and/or environmental context. Studies that describe novel biological or clinical insights as well as methods-focused studies that describe novel methods for the large-scale study of any and all biomolecules in cells and tissues, such as mass spectrometry, protein and nucleic acid microarrays, genomics, next-generation sequencing and computational algorithms and methods are all within the scope of Proteome Science, as are electron topography, structural methods, proteogenomics, chemical proteomics, stem cell proteomics, organelle proteomics, plant and microbial proteomics. In spite of its name, Proteome Science considers all aspects of large-scale and systems studies because ultimately any mechanism that results in genomic and metabolomic changes will affect or be affected by the proteome. To reflect this intrinsic relationship of biological systems, Proteome Science will consider all such articles.
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