尖端的单分子技术揭示了细胞生物化学的新机制。

IF 10.4 1区 生物学 Q1 BIOPHYSICS Annual Review of Biophysics Pub Date : 2021-05-06 Epub Date: 2021-03-01 DOI:10.1146/annurev-biophys-090420-083836
Souradeep Banerjee, Soham Chakraborty, Abhijit Sreepada, Devshuvam Banerji, Shashwat Goyal, Yajushi Khurana, Shubhasis Haldar
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引用次数: 10

摘要

与整体生物物理技术相比,单分子技术扩大了我们单独检测生物事件的能力,而整体生物物理技术的结果只能提供平均信息。原子力显微镜的最新发展不仅使我们能够区分单个分子的异质现象,而且使我们能够观察到单个共价键的分辨率。同样,光学镊子由于其多功能性和精度,已经成为一种有效的技术,可以解剖各种复杂的生物过程,从ClpXP蛋白酶依赖降解的纳米力学到运动蛋白依赖力的加工能力。尽管光学镊子具有优势,但该技术中使用的时间尺度与生理场景不一致,这导致了磁镊子的发展,其中蛋白质与玻璃表面共价连接,这反过来又增加了单个生物分子的观察窗口,从几分钟到几周。与光学镊子不同,磁镊子利用磁场施加扭矩,这使得它们便于研究DNA拓扑结构和拓扑异构酶的功能。使用改良的磁镊子,研究人员能够发现伴侣蛋白的机械作用,它通过在易位过程中拉动底物蛋白来支持底物蛋白,并作为机械折叠酶协助它们的天然折叠。在本文中,我们重点回顾了单分子技术的许多新作用,从单键断裂到复杂的伴侣机制,以及设计机械医学的潜力,这将是针对许多疾病的药理学干预的突破。
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Cutting-Edge Single-Molecule Technologies Unveil New Mechanics in Cellular Biochemistry.

Single-molecule technologies have expanded our ability to detect biological events individually, in contrast to ensemble biophysical technologies, where the result provides averaged information. Recent developments in atomic force microscopy have not only enabled us to distinguish the heterogeneous phenomena of individual molecules, but also allowed us to view up to the resolution of a single covalent bond. Similarly, optical tweezers, due to their versatility and precision, have emerged as a potent technique to dissect a diverse range of complex biological processes, from the nanomechanics of ClpXP protease-dependent degradation to force-dependent processivity of motor proteins. Despite the advantages of optical tweezers, the time scales used in this technology were inconsistent with physiological scenarios, which led to the development of magnetic tweezers, where proteins are covalently linked with the glass surface, which in turn increases the observation window of a single biomolecule from minutes to weeks. Unlike optical tweezers, magnetic tweezers use magnetic fields to impose torque, which makes them convenient for studying DNA topology and topoisomerase functioning. Using modified magnetic tweezers, researchers were able to discover the mechanical role of chaperones, which support their substrate proteinsby pulling them during translocation and assist their native folding as a mechanical foldase. In this article, we provide a focused review of many of these new roles of single-molecule technologies, ranging from single bond breaking to complex chaperone machinery, along with the potential to design mechanomedicine, which would be a breakthrough in pharmacological interventions against many diseases.

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来源期刊
Annual Review of Biophysics
Annual Review of Biophysics 生物-生物物理
CiteScore
21.00
自引率
0.00%
发文量
25
期刊介绍: The Annual Review of Biophysics, in publication since 1972, covers significant developments in the field of biophysics, including macromolecular structure, function and dynamics, theoretical and computational biophysics, molecular biophysics of the cell, physical systems biology, membrane biophysics, biotechnology, nanotechnology, and emerging techniques.
期刊最新文献
Biophysical Principles Emerging from Experiments on Protein-Protein Association and Aggregation. Ancestral Reconstruction and the Evolution of Protein Energy Landscapes. The Effects of Codon Usage on Protein Structure and Folding. Translation Dynamics of Single mRNAs in Live Cells. Mitochondrial Dynamics at Different Levels: From Cristae Dynamics to Interorganellar Cross Talk.
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