阿根廷西北部高海拔湿地微生物群落的末端限制性片段长度多态性初步表征。

Marcela Ferrero, María E Farías, Faustino Siñeriz
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摘要

拉古纳德波苏埃洛斯是阿根廷西北部安第斯山脉海拔3600米的广阔湿地。主湖位于内陆盆地中央坳陷,富含Cu、As、Fe等矿物。它从地下河道和两条主要支流收集水,即北部的圣卡塔利娜河和南部的辛赛尔河。在旱季和雨季之后,湖面每年都处于收缩-扩张周期,蒸发期盐度增加。居住在这些特殊环境中的原核生物还没有被描述,一些这样的地方已经被调查用于微生物多样性研究。为系统探索Laguna de Pozuelos湿地和Cincel河水湖细菌的底层群落,对细菌16S rRNA基因(rnas)进行PCR扩增,并采用末端限制性片段长度多态性(T-RFLP)分析。利用T-RFLP对微生物群落进行分析,鉴定出至少19个操作分类单元(OTU)。我们分析了RsaI、HaeIII和HhaI多酶切得到的T-RF模式,以便初步了解这种复杂微生物群落的相对多样性。通过三种限制性内切酶的联合使用,确定了该特定位置的细菌种群。
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Preliminary characterization of microbial communities in high altitude wetlands of northwestern Argentina by determining terminal restriction fragment length polymorphisms.

Laguna de Pozuelos is an extensive wetland in Morthwestern Argentina at 3,600 m above sea level in the Argentinean Andes. The principal lake, placed in the central depression of endorheic basin, is rich in minerals like Cu, As, Fe, etc. It collects water from underground courses and from two main tributaries, namely Santa Catalina River to the north and Cincel River to the south. Following the dry and rainy seasons, the surface of the lake is subject to an annual contraction-expansion cycle, with increasing of salinity during evaporation period. Prokaryotes inhabitants these particular environments have been not described and a few of such places have been surveyed for microbial diversity studies. To systematically explore the underlying communities of Bacteria from the water lake of Laguna de Pozuelos wetland and Cincel River, bacterial 16S rRNA genes (rDNAs) were PCR amplified and analyzed by terminal restriction fragment length polymorphism (T-RFLP) analysis. Analysis of the microbial community with T-RFLP identified a minimum of 19 operational taxonomic units (OTU). T-RF patterns derived from multiple-enzyme digestion with RsaI, HaeIII and HhaI were analyzed in order to provide a preliminary picture of the relative diversity of this complex microbial community. By the combined use of the three restriction endonucleases bacterial populations of this particular place were identified.

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