转座子IS10新插入位点的序列分析

XIANG Tai-He, WANG Li-Lin, WANG Hui-Zhong
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引用次数: 3

摘要

通过转座子IS10失活携带sacB基因的质粒pXT3sacB,获得了sacB突变体。该突变质粒DNA的测序(GenBank登录号:AY580883.1)显示22 bp倒置重复序列侧翼的IS10为5 ' - ctgagagatcccctcataatttt -3 '和5 ' -AAATCATTAGGGGATTCATCAG-3 ',与之前报道的结果相似。然而,IS10相邻的靶序列为5 ' -TGCTTGGTT-3 ',而不是之前报道的5 ' -NGCTNAGCN-3 '。据我们所知,这是关于IS10新插入位点的第一篇报道。此外,Southern blot杂交证实,可移动的IS10来源于寄主菌株大肠杆菌DH5α的染色体DNA,并且在DH5α基因组中有2个拷贝。
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Sequence Analysis of a Novel Insertion Site of Transposon IS10

A sacB mutant was obtained by transposon IS10 inactivation of a plasmid pXT3sacB carrying the sacB gene. Sequencing of this mutant plasmid DNA (GenBank accession No. AY580883.1) showed that the IS10 flanking the 22 bp inverted repeats were 5′-CTGAGAGATCCCCTCATAATTT-3′ and 5′-AAATCATTAGGGGATTCATCAG-3′, which were the similar to those published in reports previously. However, the target sequence adjacent to IS10 was 5′-TGCTTGGTT-3′ instead of the previously reported 5′-NGCTNAGCN-3′. To our knowledge, this is the first report on the novel insertion site of IS10. In addition, Southern blot hybridization confirmed that the mobile IS10 originated from the chromosomal DNA of the host strain Escherichia coli DH5α and that there were two copies in the DH5α genome.

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