污名基因转移与通用编码的出现。

Hfsp Journal Pub Date : 2009-10-01 Epub Date: 2009-08-06 DOI:10.2976/1.3175813
Mikhail Prokopenko, Daniel Polani, Matthew Chadwick
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引用次数: 7

摘要

我们考虑了一个简单的信息理论模型,用于接近“编码阈值”的进化动力学,其中象征性地表示核酸序列的能力在响应环境条件的变化时出现。我们研究了“原始细胞”的动力学与其原始符号表示之间的耦合在嘈杂环境中有利于保存原始细胞信息的条件。特别是,我们感兴趣的是理解“错误阈值”级别上的行为,在我们的例子中,这是一个完整的“错误间隔”。这种有用的耦合伴随着内部处理的自组织,也就是说,在演化的系统中复杂性的增加。其次,我们研究了不同的原细胞是否以及如何通过联合编码来共享这些信息,即使它们的个体动态略有不同。讨论了生物遗传密码产生的意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Stigmergic gene transfer and emergence of universal coding.

We consider a simple information-theoretic model for evolutionary dynamics approaching the "coding threshold," where the capacity to symbolically represent nucleic acid sequences emerges in response to a change in environmental conditions. We study the conditions when a coupling between the dynamics of a "proto-cell" and its proto-symbolic representation becomes beneficial in terms of preserving the proto-cell's information in a noisy environment. In particular, we are interested in understanding the behavior at the "error threshold" level, which, in our case, turns out to be a whole "error interval." The useful coupling is accompanied by self-organization of internal processing, i.e., an increase in complexity within the evolving system. Second, we study whether and how different proto-cells can stigmergically share such information via a joint encoding, even if they have slightly different individual dynamics. Implications for the emergence of biological genetic code are discussed.

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Hfsp Journal
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