韩国囊性纤维化患者CFTR基因突变的异质性谱

Korean Journal of Laboratory Medicine Pub Date : 2011-07-01 Epub Date: 2011-06-28 DOI:10.3343/kjlm.2011.31.3.219
Haiyoung Jung, Chang-Seok Ki, Won-Jung Koh, Kang-Mo Ahn, Sang-Il Lee, Jeong-Ho Kim, Jae Sung Ko, Jeong Kee Seo, Seung-Ick Cha, Eun-Sil Lee, Jong-Won Kim
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引用次数: 16

摘要

背景:囊性纤维化(CF)是白种人最常见的遗传性疾病之一。囊性纤维化跨膜传导调节基因(CFTR)最常见的突变已经在高加索人群中得到了很好的证实。然而,在韩国人中,迄今为止很少有基因证实的CF病例,突变谱似乎与高加索人的观察结果大不相同。方法:在本研究中,我们描述了2例韩国CF患者的病例,给出了鉴定其CFTR基因突变的测序结果,并总结了先前报道的韩国CF患者CFTR突变谱的结果。所描述的突变是通过对CFTR基因的完整编码区和侧翼内含子序列进行直接测序分析来确定的,然后进行多重连接依赖探针扩增(MLPA)分析,以检测直接测序方法无法识别的基因缺失或重复。结果:2例患者中检出3个CFTR突变,分别为p.Q98R、c.2052delA和c.579+5G>A。在对9例韩国CF患者(包括本研究中的2例患者)的分析中,p.Q98R突变是唯一反复观察到的突变,频率为18.8%(3/16等位基因)。此外,在来自囊性纤维化突变数据库的白种人筛查组的32个常见突变中,只有一个突变(c.3272-26A>G)被发现。结论:建议对韩国CF患者进行基因分析,首先对CFTR基因进行全基因测序,然后进行MLPA分析,而不是使用白种人群体中常见的基于靶向测序的突变筛查小组。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Heterogeneous spectrum of CFTR gene mutations in Korean patients with cystic fibrosis.

Background: Cystic fibrosis (CF) is one of the most common hereditary disorders among Caucasians. The most common mutations of the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been well established among Caucasian populations. In Koreans, however, there are very few cases of genetically confirmed CF thus far, and the spectrum of mutations seems quite different from that observed in Caucasians.

Methods: In the present study, we describe the cases of 2 Korean CF patients, present sequencing results identifying mutations in their CFTR gene, and summarize the results of CFTR mutational spectrum from previously reported Korean CF patients. The mutations described were identified by performing direct sequencing analysis of the complete coding regions and flanking intronic sequences of the CFTR gene, followed by multiplex ligation-dependent probe amplification (MLPA) analysis in order to detect gene deletions or duplications that could not be identified by a direct sequencing method.

Results: Three CFTR mutations were identified in the 2 patients, including p.Q98R, c.2052delA, and c.579+5G>A. In an analysis of 9 Korean CF patients that included the 2 patients presented in this study, p.Q98R mutation was the only recurrently observed mutation with a frequency of 18.8% (3/16 alleles). Furthermore, only one of the mutations (c.3272-26A>G) was found among the 32 common mutations in the screening panel for Caucasians from the Cystic Fibrosis Mutation Database.

Conclusions: Sequencing of the entire CFTR gene followed by MLPA analysis, rather than using the targeted sequencing-based screening panel for mutations commonly found in Caucasian populations, is recommended for genetic analysis of Korean CF patients.

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来源期刊
Korean Journal of Laboratory Medicine
Korean Journal of Laboratory Medicine 医学-医学实验技术
自引率
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发文量
1
审稿时长
>12 weeks
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