古细菌基因组守护者提供真核生物DNA复制和损伤反应蛋白的见解。

IF 2.3 4区 生物学 Q3 MICROBIOLOGY Archaea-An International Microbiological Journal Pub Date : 2014-02-20 eCollection Date: 2014-01-01 DOI:10.1155/2014/206735
David S Shin, Ashley J Pratt, John A Tainer
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引用次数: 20

摘要

作为生命的第三个领域,古细菌,像真核生物和细菌一样,必须有强大的DNA复制和修复复合体来确保基因组的保真度。此外,古细菌显示出广泛的独特栖息地和特征,结构生物学家越来越重视这些特征。由于古细菌包括能够承受各种环境压力的极端微生物,它们为理解对基因组完整性和应激反应至关重要的酶和途径提供了基本系统。这样的古细菌极端微生物提供了生命周期表的关键数据,以及生物化学,地球化学和适应策略的物理限制,使生物体在环境压力下茁壮成长,这与确定我们所知道的生命边界有关。具体来说,古细菌的酶结构已经告知了关键的DNA修复蛋白和复合物的结构和机制。这些结构具有温度捕获灵活复合物和揭示瞬态和动态复合物核心结构域的附加能力,为在极端环境胁迫下保持基因组完整性的机制提供了见解。因此,这篇综述中提到的DNA损伤反应蛋白结构为面对环境压力时基因组完整性提供了基础,对生命的所有领域以及生物制造、天体生物学和医学都有影响。
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Archaeal genome guardians give insights into eukaryotic DNA replication and damage response proteins.

As the third domain of life, archaea, like the eukarya and bacteria, must have robust DNA replication and repair complexes to ensure genome fidelity. Archaea moreover display a breadth of unique habitats and characteristics, and structural biologists increasingly appreciate these features. As archaea include extremophiles that can withstand diverse environmental stresses, they provide fundamental systems for understanding enzymes and pathways critical to genome integrity and stress responses. Such archaeal extremophiles provide critical data on the periodic table for life as well as on the biochemical, geochemical, and physical limitations to adaptive strategies allowing organisms to thrive under environmental stress relevant to determining the boundaries for life as we know it. Specifically, archaeal enzyme structures have informed the architecture and mechanisms of key DNA repair proteins and complexes. With added abilities to temperature-trap flexible complexes and reveal core domains of transient and dynamic complexes, these structures provide insights into mechanisms of maintaining genome integrity despite extreme environmental stress. The DNA damage response protein structures noted in this review therefore inform the basis for genome integrity in the face of environmental stress, with implications for all domains of life as well as for biomanufacturing, astrobiology, and medicine.

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来源期刊
CiteScore
7.50
自引率
0.00%
发文量
1
审稿时长
>12 weeks
期刊介绍: Archaea is a peer-reviewed, Open Access journal that publishes original research articles as well as review articles dealing with all aspects of archaea, including environmental adaptation, enzymology, genetics and genomics, metabolism, molecular biology, molecular ecology, phylogeny, and ultrastructure. Bioinformatics studies and biotechnological implications of archaea will be considered. Published since 2002, Archaea provides a unique venue for exchanging information about these extraordinary prokaryotes.
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