阿尔茨海默病lncRNA - miRNA - mRNA调控网络的综合分析。

IF 1.4 4区 医学 Q4 NEUROSCIENCES Acta neurobiologiae experimentalis Pub Date : 2022-01-01 DOI:10.55782/ane-2022-025
Fenghua Li, Zaihong Lin, Gengsheng Tian
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引用次数: 2

摘要

阿尔茨海默病(AD)是一种进行性和不可逆的神经退行性疾病,与认知功能下降和严重的行为异常有关。本研究旨在探讨AD发生发展的机制。对GSE16759进行综合分析,鉴定差异表达的lncRNAs (DElncRNAs)、miRNAs (DEmiRNAs)和mrna (demmrnas)。差异表达rna (DERs)用于后续分析,包括模块基因分析、途径富集分析和相互作用网络分析。最后,构建由lncRNA - miRNA - mRNA - pathway组成的AD相关网络。在AD组和正常对照组之间共鉴定出431个demrna, 35个delncrna和103个demirna。demrna在局灶黏附、内吞作用、mTOR信号通路等13条通路中显著富集。最终筛选出三个与AD有显著相关性的模块。构建AD相关网络,包括2个lncrna (A2M‑AS1和ZNF571‑AS1)、1个miRNA (hsa‑miR‑206)、2个mrna (NOTCH3和JAG1)和2个通路(notch信号通路和内分泌抵抗)。A2M‑AS1、ZNF571‑AS1、hsa‑miR‑206、NOTCH3和JAG1可能通过notch信号通路和内分泌抵抗参与AD的发病机制。
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Comprehensive analysis of lncRNA‑miRNA‑mRNA regulatory networks for Alzheimer's disease.

Alzheimer's disease (AD) is a progressive and irreversible neurodegenerative disease, associated with a decreased cognitive function and severe behavioral abnormalities. This study aimed to explore mechanisms of development and progression of AD. Comprehensive analysis of GSE16759 was performed to identify the differentially expressed lncRNAs (DElncRNAs), miRNAs (DEmiRNAs), and mRNAs (DEmRNAs). The differentially expressed RNAs (DERs) were used for the subsequent analysis, including module genes analysis, pathway enrichment analysis, and interaction network analysis. Finally, an AD‑associated network consisting of lncRNA‑miRNA‑mRNA‑pathway was constructed. A total of 431 DEmRNAs, 35 DElncRNAs, and 103 DEmiRNAs between the AD group and the normal control group were identified. DEmRNAs were significantly enriched in 13 pathways, such as focal adhesion, endocytosis, and mTOR signaling pathway. Three modules significantly related to AD were finally screened. The AD‑associated network was constructed, including 2 lncRNAs (A2M‑AS1 and ZNF571‑AS1), 1 miRNA (hsa‑miR‑206), 2 mRNAs (NOTCH3 and JAG1), and 2 pathways (notch signaling pathway and endocrine resistance). A2M‑AS1, ZNF571‑AS1, hsa‑miR‑206, NOTCH3 and JAG1 may be involved in the mechanisms of AD through notch signaling pathway and endocrine resistance.

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来源期刊
CiteScore
2.20
自引率
7.10%
发文量
40
审稿时长
>12 weeks
期刊介绍: Acta Neurobiologiae Experimentalis (ISSN: 0065-1400 (print), eISSN: 1689-0035) covers all aspects of neuroscience, from molecular and cellular neurobiology of the nervous system, through cellular and systems electrophysiology, brain imaging, functional and comparative neuroanatomy, development and evolution of the nervous system, behavior and neuropsychology to brain aging and pathology, including neuroinformatics and modeling.
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