大肠杆菌半乳糖醇-1-磷酸5-脱氢酶对半乳糖醇1-磷酸的对映选择性氧化。

Rocío Benavente, María Esteban-Torres, Gert-Wieland Kohring, Álvaro Cortés-Cabrera, Pedro A Sánchez-Murcia, Federico Gago, Iván Acebrón, Blanca de las Rivas, Rosario Muñoz, José M Mancheño
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引用次数: 7

摘要

半乳糖-1-磷酸5-脱氢酶(GPDH)是一种多元醇脱氢酶,属于中链脱氢酶/还原酶(MDR)超家族。它催化Zn(2+)-和NAD(+)-依赖的l -半乳糖醇1-磷酸立体选择性脱氢成d -塔格糖6-磷酸。本文报道了大肠杆菌GPDH的三种晶体结构:催化位点与Zn(2+)的开放状态和与多元醇Tris和甘油配合物的封闭状态。GPDH的封闭状态显示没有结合辅因子,这与典型哺乳动物肝脏酒精脱氢酶的构象转变不同。GPDH同型二聚体中主要的亚基接触界面呈现一个大的内部空腔,这可能有助于亚基之间的相对运动。底物类似物甘油结合在活性部位部分模拟半乳糖醇1-磷酸的催化相关主链。甘油结合模式首次在多元醇脱氢酶中揭示了五配位锌离子与多元醇的配合物,以及伯羟基与保守的Glu144之间的强氢键,这种相互作用最初是在30多年前提出的,支持这种酸性残留物的催化作用。
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Enantioselective oxidation of galactitol 1-phosphate by galactitol-1-phosphate 5-dehydrogenase from Escherichia coli.

Galactitol-1-phosphate 5-dehydrogenase (GPDH) is a polyol dehydrogenase that belongs to the medium-chain dehydrogenase/reductase (MDR) superfamily. It catalyses the Zn(2+)- and NAD(+)-dependent stereoselective dehydrogenation of L-galactitol 1-phosphate to D-tagatose 6-phosphate. Here, three crystal structures of GPDH from Escherichia coli are reported: that of the open state of GPDH with Zn(2+) in the catalytic site and those of the closed state in complex with the polyols Tris and glycerol, respectively. The closed state of GPDH reveals no bound cofactor, which is at variance with the conformational transition of the prototypical mammalian liver alcohol dehydrogenase. The main intersubunit-contacting interface within the GPDH homodimer presents a large internal cavity that probably facilitates the relative movement between the subunits. The substrate analogue glycerol bound within the active site partially mimics the catalytically relevant backbone of galactitol 1-phosphate. The glycerol binding mode reveals, for the first time in the polyol dehydrogenases, a pentacoordinated zinc ion in complex with a polyol and also a strong hydrogen bond between the primary hydroxyl group and the conserved Glu144, an interaction originally proposed more than thirty years ago that supports a catalytic role for this acidic residue.

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