重组人2-硫酸伊杜醛酸酯硫酸酯酶的生物信息学分析。

Q3 Immunology and Microbiology Open Microbiology Journal Pub Date : 2016-05-31 eCollection Date: 2016-01-01 DOI:10.2174/1874285801610010124
Edwin D Morales-Álvarez, Claudia M Rivera-Hoyos, Patricia Landázuri, Raúl A Poutou-Piñales, Aura M Pedroza-Rodríguez
{"title":"重组人2-硫酸伊杜醛酸酯硫酸酯酶的生物信息学分析。","authors":"Edwin D Morales-Álvarez,&nbsp;Claudia M Rivera-Hoyos,&nbsp;Patricia Landázuri,&nbsp;Raúl A Poutou-Piñales,&nbsp;Aura M Pedroza-Rodríguez","doi":"10.2174/1874285801610010124","DOIUrl":null,"url":null,"abstract":"<p><p>Mucopolysaccharidosis type II is a human recessive disease linked to the X chromosome caused by deficiency of lysosomal enzyme Iduronate 2-Sulfate Sulfatase (IDS), which leads to accumulation of glycosaminoglycans in tissues and organs. The human enzyme has been expressed in Escherichia coli and Pichia pastoris in attempt to develop more successful expression systems that allow the production of recombinant IDS for Enzyme Replacement Therapy (ERT). However, the preservation of native signal peptide in the sequence has caused conflicts in processing and recognition in the past, which led to problems in expression and enzyme activity. With the main object being the improvement of the expression system, we eliminate the native signal peptide of human recombinant IDS. The resulting sequence showed two modified codons, thus, our study aimed to analyze computationally the nucleotide sequence of the IDSnh without signal peptide in order to determine the 3D structure and other biochemical properties to compare them with the native human IDS (IDSnh). Results showed that there are no significant differences between both molecules in spite of the two-codon modifications detected in the recombinant DNA sequence. </p>","PeriodicalId":38953,"journal":{"name":"Open Microbiology Journal","volume":"10 ","pages":"124-32"},"PeriodicalIF":0.0000,"publicationDate":"2016-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/fe/5f/TOMICROJ-10-124.PMC4899537.pdf","citationCount":"5","resultStr":"{\"title\":\"Bioinformatic Analysis of the Human Recombinant Iduronate 2-Sulfate Sulfatase.\",\"authors\":\"Edwin D Morales-Álvarez,&nbsp;Claudia M Rivera-Hoyos,&nbsp;Patricia Landázuri,&nbsp;Raúl A Poutou-Piñales,&nbsp;Aura M Pedroza-Rodríguez\",\"doi\":\"10.2174/1874285801610010124\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Mucopolysaccharidosis type II is a human recessive disease linked to the X chromosome caused by deficiency of lysosomal enzyme Iduronate 2-Sulfate Sulfatase (IDS), which leads to accumulation of glycosaminoglycans in tissues and organs. The human enzyme has been expressed in Escherichia coli and Pichia pastoris in attempt to develop more successful expression systems that allow the production of recombinant IDS for Enzyme Replacement Therapy (ERT). However, the preservation of native signal peptide in the sequence has caused conflicts in processing and recognition in the past, which led to problems in expression and enzyme activity. With the main object being the improvement of the expression system, we eliminate the native signal peptide of human recombinant IDS. The resulting sequence showed two modified codons, thus, our study aimed to analyze computationally the nucleotide sequence of the IDSnh without signal peptide in order to determine the 3D structure and other biochemical properties to compare them with the native human IDS (IDSnh). Results showed that there are no significant differences between both molecules in spite of the two-codon modifications detected in the recombinant DNA sequence. </p>\",\"PeriodicalId\":38953,\"journal\":{\"name\":\"Open Microbiology Journal\",\"volume\":\"10 \",\"pages\":\"124-32\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-05-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/fe/5f/TOMICROJ-10-124.PMC4899537.pdf\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Open Microbiology Journal\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.2174/1874285801610010124\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2016/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q3\",\"JCRName\":\"Immunology and Microbiology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Open Microbiology Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2174/1874285801610010124","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2016/1/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"Immunology and Microbiology","Score":null,"Total":0}
引用次数: 5

摘要

粘多糖病II型是一种与X染色体相关的人类隐性疾病,由溶酶体酶伊杜醛酸2-硫酸盐硫酸酯酶(IDS)缺乏引起,导致糖胺聚糖在组织和器官中积累。人类酶已在大肠杆菌和毕赤酵母中表达,试图开发更成功的表达系统,以生产用于酶替代疗法(ERT)的重组IDS。然而,由于在序列中保留天然信号肽,过去在加工和识别上存在冲突,导致表达和酶活性出现问题。以改进重组人IDS的表达体系为主要目的,剔除重组人IDS的天然信号肽。因此,我们的研究旨在计算分析不含信号肽的IDSnh的核苷酸序列,以确定其三维结构和其他生化特性,并将其与天然人类IDS (IDSnh)进行比较。结果表明,尽管在重组DNA序列中检测到双密码子修饰,但两种分子之间没有显著差异。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Bioinformatic Analysis of the Human Recombinant Iduronate 2-Sulfate Sulfatase.

Mucopolysaccharidosis type II is a human recessive disease linked to the X chromosome caused by deficiency of lysosomal enzyme Iduronate 2-Sulfate Sulfatase (IDS), which leads to accumulation of glycosaminoglycans in tissues and organs. The human enzyme has been expressed in Escherichia coli and Pichia pastoris in attempt to develop more successful expression systems that allow the production of recombinant IDS for Enzyme Replacement Therapy (ERT). However, the preservation of native signal peptide in the sequence has caused conflicts in processing and recognition in the past, which led to problems in expression and enzyme activity. With the main object being the improvement of the expression system, we eliminate the native signal peptide of human recombinant IDS. The resulting sequence showed two modified codons, thus, our study aimed to analyze computationally the nucleotide sequence of the IDSnh without signal peptide in order to determine the 3D structure and other biochemical properties to compare them with the native human IDS (IDSnh). Results showed that there are no significant differences between both molecules in spite of the two-codon modifications detected in the recombinant DNA sequence.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Open Microbiology Journal
Open Microbiology Journal Immunology and Microbiology-Immunology and Microbiology (all)
CiteScore
1.80
自引率
0.00%
发文量
24
期刊介绍: The Open Microbiology Journal is a peer-reviewed open access journal which publishes research articles, reviews/mini-reviews, case studies, guest edited thematic issues and short communications/letters covering theoretical and practical aspects of Microbial systematics, evolutionary microbiology, immunology, virology, parasitology , bacteriology, mycology, phycology, protozoology, microbial ecology, molecular biology, microbial physiology, biochemistry, microbial pathogenesis, host-microbe interaction, systems microbiology, synthetic microbiology, bioinformatics. The Open Microbiology Journal , a peer-reviewed journal, is an important and reliable source of current information on developments in the field. The emphasis will be on publishing quality papers rapidly and freely available to researchers worldwide.
期刊最新文献
Variations in Bacteriological and Physicochemical Water Quality Characteristics of Asata River, Enugu, Nigeria Molecular Detection of Chicken Anemia Virus from Chickens in Yobe South, Nigeria Isolation of Bacterial Diversity in Oil Mill Water Using Ribosomal Genes Based Fingerprinting from Morocco Characterization of Enterotoxins Produced by Food Isolates of Staphylococcus aureus Optimization of Extracellular Polysaccharide Substances from Lactic Acid Bacteria Isolated from Fermented Dairy Products
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1