在大型临床队列中无监督发现肺气肿亚型

Polina Binder, Nematollah K Batmanghelich, Raul San Jose Estepar, Polina Golland
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摘要

肺气肿是慢性阻塞性肺病(COPD)的特征之一,而慢性阻塞性肺病通常是由吸烟引起的一种破坏性肺部疾病。肺气肿在计算机断层扫描(CT)中表现为与疾病亚型相关的各种纹理。研究表明,疾病亚型和纹理与生理指标和预后有关,但两者在临床上的特征都不明显。以前对肺气肿成像数据建模的大多数计算方法都侧重于对 CT 扫描片中的肺纹理进行监督分类。在这项工作中,我们描述了一种生成模型,它能共同捕捉疾病亚型和患者群体的异质性。我们还介绍了一种相应的推理算法,它能以无监督的方式同时发现疾病亚型和人群结构。这种方法使我们能够创建基于图像的肺气肿描述符,而不是通过人工标记当前定义的表型来识别的描述符。通过将由此产生的算法应用于大型数据集,我们确定了与不同生理指标相关的患者群体和疾病亚型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Unsupervised Discovery of Emphysema Subtypes in a Large Clinical Cohort.

Emphysema is one of the hallmarks of Chronic Obstructive Pulmonary Disorder (COPD), a devastating lung disease often caused by smoking. Emphysema appears on Computed Tomography (CT) scans as a variety of textures that correlate with disease subtypes. It has been shown that the disease subtypes and textures are linked to physiological indicators and prognosis, although neither is well characterized clinically. Most previous computational approaches to modeling emphysema imaging data have focused on supervised classification of lung textures in patches of CT scans. In this work, we describe a generative model that jointly captures heterogeneity of disease subtypes and of the patient population. We also describe a corresponding inference algorithm that simultaneously discovers disease subtypes and population structure in an unsupervised manner. This approach enables us to create image-based descriptors of emphysema beyond those that can be identified through manual labeling of currently defined phenotypes. By applying the resulting algorithm to a large data set, we identify groups of patients and disease subtypes that correlate with distinct physiological indicators.

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