基于混合生成-判别框架的术前和术后多模态磁共振成像卷中胶质瘤的分割。

Ke Zeng, Spyridon Bakas, Aristeidis Sotiras, Hamed Akbari, Martin Rozycki, Saima Rathore, Sarthak Pati, Christos Davatzikos
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摘要

我们提出了一种在多模态磁共振成像卷中分割低级别和高级别胶质瘤的方法。所提出的框架是我们之前工作[6,7]的扩展,增加了一个用于分割术后扫描图像的组件。所提出的方法基于生成-判别混合模型。首先,基于联合分割-注册框架的生成模型用于将脑部扫描图像分割为癌症组织和健康组织。其次,使用梯度提升分类方案,根据多名患者的信息完善肿瘤分割。在 BRAin Tumor Segmentation (BRATS) 2016 挑战赛的训练阶段,我们在 218 个案例中评估了我们的方法,并报告了令人鼓舞的结果。在测试阶段,在对 191 个未见病例进行额外评估后,我们提出的方法跻身表现最佳的方法之列。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework.

We present an approach for segmenting both low- and high-grade gliomas in multimodal magnetic resonance imaging volumes. The proposed framework is an extension of our previous work [6,7], with an additional component for segmenting post-operative scans. The proposed approach is based on a hybrid generative-discriminative model. Firstly, a generative model based on a joint segmentation-registration framework is used to segment the brain scans into cancerous and healthy tissues. Secondly, a gradient boosting classification scheme is used to refine tumor segmentation based on information from multiple patients. We evaluated our approach in 218 cases during the training phase of the BRAin Tumor Segmentation (BRATS) 2016 challenge and report promising results. During the testing phase, the proposed approach was ranked among the top performing methods, after being additionally evaluated in 191 unseen cases.

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Leveraging 2D Deep Learning ImageNet-trained models for Native 3D Medical Image Analysis. Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: 8th International Workshop, BrainLes 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18, 2022, Revised Selected Papers Optimization of Deep Learning Based Brain Extraction in MRI for Low Resource Environments. Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Virtual Event, September 27, 2021, Revised Selected Papers, Part I Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries: 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Virtual Event, September 27, 2021, Revised Selected Papers, Part II
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