[LAMP法简单快速分析碳青霉烯酶大五基因的试验]。

Yumiko Funashima, Kazuyuki Sugahara, Yuya Hirata, Kyohei Kato, Kenichi Sato, Yasuharu Sasaki, Zenzo Nagasawa, Tsukuru Umemura
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引用次数: 0

摘要

碳青霉烯酶的可靠检测和分型对感染性疾病的治疗具有重要意义。本研究根据最新资料设计LAMP引物,建立了碳青霉烯酶大五基因的检测方法。菌株DNA提取采用碱性煮沸法和商用试剂盒。LAMP法的反应温度为VIM: 65℃,NDM: 63℃,KPC: 65℃,oxa -48 like: 65℃,IMP: 61℃。同时LAMP法在63℃下检测60 min,最多可检测103个拷贝/ml。36株经多重pcr验证的LAMP反应性为VIM (4/4: LAMP法阳性菌株数/评估菌株数)、NDM(2/2)、KPC(4/4)、oxa -48 like(4/4)、IMP(17/17)。LAMP法测定的碳青霉烯酶类型与多重PCR一致。所有菌株均在30 min内检出。在VIM中,VIM-1-like和VIM-2-like均能检出。在本研究中,虽然评估菌株的数量和变化有限,但LAMP法作为一种简单快速的碳青霉烯酶检测方法在临床上是有用的。
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[A trial of simple and rapid carbapenemase big five gene analysis using LAMP method].

Reliable detection and typing of carbapenemase is important in the treatment of infectious diseases. In this study we newly designed LAMP primer based on the latest information, and established a detection method for Carbapenemase Big five gene. For DNA extraction from strains, alkaline boiling method and commercial kit were used. The reaction temperatures of the LAMP method was VIM: 65°C, NDM: 63°C, KPC: 65°C, OXA-48-like: 65°C, IMP: 61°C. And simultaneous LAMP method was at 63°C, for 60 min. It was possible to detect up to 103 copies/ml. The reactivity of LAMP using 36 strains verified by Multiplex-PCR was VIM (4/4: number of LAMP method positive strains/number of strains evaluated), NDM (2/2), KPC (4/4), OXA-48-like (4/4), IMP (17/17). The type of carbapenemase determined by the LAMP method were all consistent with multiplex PCR. All strains were detected within 30 min. In VIM, both VIM-1-like and VIM-2-like were able to detect. In this study, although the number and variation of the strains evaluated was limited, LAMP method was clinically useful as a simple and rapid carbapenemase detection method.

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