30年过去了,地杆菌的带电生理学。

2区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Advances in Microbial Physiology Pub Date : 2019-01-01 Epub Date: 2019-05-15 DOI:10.1016/bs.ampbs.2019.02.007
Gemma Reguera, Kazem Kashefi
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引用次数: 71

摘要

geoobacteraceae家族是唯一有效的Geobacter属,包括普遍存在于土壤、沉积物和地下环境中的三角洲变形菌,其中金属还原是一个活跃的过程。近三十年的研究为以前不知道微生物进行的环境过程和生物地球化学反应提供了新的见解。Geobacter细菌所扮演的环境角色的核心是它们整合氧化还原途径和调节检查点的能力,这些氧化还原途径和调节检查点可以最大限度地提高生长效率,同时呼吸金属氧化物,特别是通常丰富的铁氧化物。这种代谢专门化是由多种代谢反应、呼吸链和感觉网络补充的,这些反应允许特定成员对环境线索做出适应性反应,分别将有机和无机污染物整合到它们的氧化和还原性代谢中。因此,地杆菌科是微生物群落的重要成员,它们在铁还原条件下降解碳氢污染物,并直接或间接地减少放射性核素、有毒金属和氧化态氮。它们能够产生导电毛作为纳米线,将呼吸电子放电到固相电子受体和放射性核素,或用于电流收集生物膜中的连接细胞,这突出了独特的生理特性,使这些生物成为生物修复、生物能源和生物电子学应用的有吸引力的生物平台。在这里,我们回顾了一些最显著的生理特征,在地杆菌物种描述,因为第一个模型代表在纯培养中恢复。我们提供了环境研究的历史记录,为许多生理学研究和实验室工具奠定了基础,这些工具为原始和污染环境中Geobacter在微生物群落功能中的作用提供了新的见解。我们特别关注基础和应用方面的最新研究,这些研究有助于将该领域扩展到新的方向并促进跨学科知识的发展。30年过去了,Geobacter的令人兴奋的生理机能似乎还活着。
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The electrifying physiology of Geobacter bacteria, 30 years on.

The family Geobacteraceae, with its only valid genus Geobacter, comprises deltaproteobacteria ubiquitous in soil, sediments, and subsurface environments where metal reduction is an active process. Research for almost three decades has provided novel insights into environmental processes and biogeochemical reactions not previously known to be carried out by microorganisms. At the heart of the environmental roles played by Geobacter bacteria is their ability to integrate redox pathways and regulatory checkpoints that maximize growth efficiency with electron donors derived from the decomposition of organic matter while respiring metal oxides, particularly the often abundant oxides of ferric iron. This metabolic specialization is complemented by versatile metabolic reactions, respiratory chains, and sensory networks that allow specific members to adaptively respond to environmental cues to integrate organic and inorganic contaminants in their oxidative and reductive metabolism, respectively. Thus, Geobacteraceae are important members of the microbial communities that degrade hydrocarbon contaminants under iron-reducing conditions and that contribute, directly or indirectly, to the reduction of radionuclides, toxic metals, and oxidized species of nitrogen. Their ability to produce conductive pili as nanowires for discharging respiratory electrons to solid-phase electron acceptors and radionuclides, or for wiring cells in current-harvesting biofilms highlights the unique physiological traits that make these organisms attractive biological platforms for bioremediation, bioenergy, and bioelectronics application. Here we review some of the most notable physiological features described in Geobacter species since the first model representatives were recovered in pure culture. We provide a historical account of the environmental research that has set the foundation for numerous physiological studies and the laboratory tools that had provided novel insights into the role of Geobacter in the functioning of microbial communities from pristine and contaminated environments. We pay particular attention to latest research, both basic and applied, that has served to expand the field into new directions and to advance interdisciplinary knowledge. The electrifying physiology of Geobacter, it seems, is alive and well 30 years on.

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来源期刊
Advances in Microbial Physiology
Advances in Microbial Physiology 生物-生化与分子生物学
CiteScore
6.20
自引率
0.00%
发文量
16
期刊介绍: Advances in Microbial Physiology publishes topical and important reviews, interpreting physiology to include all material that contributes to our understanding of how microorganisms and their component parts work. First published in 1967, the editors have always striven to interpret microbial physiology in the broadest context and have never restricted the contents to traditional views of whole cell physiology.
期刊最新文献
Preface. Biological functions of bacterial lysophospholipids. Redefining the bacterial Type I protein secretion system. Purine catabolism by enterobacteria. Fumarate, a central electron acceptor for Enterobacteriaceae beyond fumarate respiration and energy conservation.
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