具有高维协变量的惩罚性变量选择的错误发现控制。

IF 0.9 4区 数学 Q3 Mathematics Statistical Applications in Genetics and Molecular Biology Pub Date : 2018-12-15 DOI:10.1515/sagmb-2018-0038
Kevin He, Xiang Zhou, Hui Jiang, Xiaoquan Wen, Yi Li
{"title":"具有高维协变量的惩罚性变量选择的错误发现控制。","authors":"Kevin He, Xiang Zhou, Hui Jiang, Xiaoquan Wen, Yi Li","doi":"10.1515/sagmb-2018-0038","DOIUrl":null,"url":null,"abstract":"<p><p>Modern bio-technologies have produced a vast amount of high-throughput data with the number of predictors much exceeding the sample size. Penalized variable selection has emerged as a powerful and efficient dimension reduction tool. However, control of false discoveries (i.e. inclusion of irrelevant variables) for penalized high-dimensional variable selection presents serious challenges. To effectively control the fraction of false discoveries for penalized variable selections, we propose a false discovery controlling procedure. The proposed method is general and flexible, and can work with a broad class of variable selection algorithms, not only for linear regressions, but also for generalized linear models and survival analysis.</p>","PeriodicalId":49477,"journal":{"name":"Statistical Applications in Genetics and Molecular Biology","volume":null,"pages":null},"PeriodicalIF":0.9000,"publicationDate":"2018-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450074/pdf/nihms-1015624.pdf","citationCount":"0","resultStr":"{\"title\":\"False discovery control for penalized variable selections with high-dimensional covariates.\",\"authors\":\"Kevin He, Xiang Zhou, Hui Jiang, Xiaoquan Wen, Yi Li\",\"doi\":\"10.1515/sagmb-2018-0038\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Modern bio-technologies have produced a vast amount of high-throughput data with the number of predictors much exceeding the sample size. Penalized variable selection has emerged as a powerful and efficient dimension reduction tool. However, control of false discoveries (i.e. inclusion of irrelevant variables) for penalized high-dimensional variable selection presents serious challenges. To effectively control the fraction of false discoveries for penalized variable selections, we propose a false discovery controlling procedure. The proposed method is general and flexible, and can work with a broad class of variable selection algorithms, not only for linear regressions, but also for generalized linear models and survival analysis.</p>\",\"PeriodicalId\":49477,\"journal\":{\"name\":\"Statistical Applications in Genetics and Molecular Biology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.9000,\"publicationDate\":\"2018-12-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450074/pdf/nihms-1015624.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Statistical Applications in Genetics and Molecular Biology\",\"FirstCategoryId\":\"100\",\"ListUrlMain\":\"https://doi.org/10.1515/sagmb-2018-0038\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Mathematics\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Statistical Applications in Genetics and Molecular Biology","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1515/sagmb-2018-0038","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Mathematics","Score":null,"Total":0}
引用次数: 0

摘要

现代生物技术产生了大量的高通量数据,预测因子的数量远远超过了样本量。惩罚性变量选择已成为一种强大而高效的降维工具。然而,在惩罚性高维变量选择中控制错误发现(即包含无关变量)是一项严峻的挑战。为了有效控制惩罚性变量选择的错误发现率,我们提出了一种错误发现控制程序。所提出的方法具有通用性和灵活性,可用于多种变量选择算法,不仅适用于线性回归,还适用于广义线性模型和生存分析。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
False discovery control for penalized variable selections with high-dimensional covariates.

Modern bio-technologies have produced a vast amount of high-throughput data with the number of predictors much exceeding the sample size. Penalized variable selection has emerged as a powerful and efficient dimension reduction tool. However, control of false discoveries (i.e. inclusion of irrelevant variables) for penalized high-dimensional variable selection presents serious challenges. To effectively control the fraction of false discoveries for penalized variable selections, we propose a false discovery controlling procedure. The proposed method is general and flexible, and can work with a broad class of variable selection algorithms, not only for linear regressions, but also for generalized linear models and survival analysis.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
1.20
自引率
11.10%
发文量
8
审稿时长
6-12 weeks
期刊介绍: Statistical Applications in Genetics and Molecular Biology seeks to publish significant research on the application of statistical ideas to problems arising from computational biology. The focus of the papers should be on the relevant statistical issues but should contain a succinct description of the relevant biological problem being considered. The range of topics is wide and will include topics such as linkage mapping, association studies, gene finding and sequence alignment, protein structure prediction, design and analysis of microarray data, molecular evolution and phylogenetic trees, DNA topology, and data base search strategies. Both original research and review articles will be warmly received.
期刊最新文献
Empirically adjusted fixed-effects meta-analysis methods in genomic studies. A CNN-CBAM-BIGRU model for protein function prediction. A heavy-tailed model for analyzing miRNA-seq raw read counts. Flexible model-based non-negative matrix factorization with application to mutational signatures. Choice of baseline hazards in joint modeling of longitudinal and time-to-event cancer survival data.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1