Nargess Heydari Beni, Reza Foodeh, Vahid Shalchyan, Mohammad Reza Daliri
{"title":"利用初级运动皮层的局部场电位进行力解码:PLS还是卡尔曼滤波回归?","authors":"Nargess Heydari Beni, Reza Foodeh, Vahid Shalchyan, Mohammad Reza Daliri","doi":"10.1007/s13246-019-00833-7","DOIUrl":null,"url":null,"abstract":"<p><p>The development of brain-computer interface (BCI) systems is an important approach in brain studies. Control of communication devices and prostheses in real-world scenarios requires complex movement parameters. Decoding a variety of neural signals captured by micro-wire arrays is a potential applicant for extracting movement-related information. The present work was conducted to compare the functionality of partial least square (PLS) regression and Kalman filter to predict the force parameter from local field potential (LFP) signals of the primary motor cortex (M1). The signals were recorded using a 16-channel micro-wire array from the forelimb-related area of the M1 of three rats performing a behavioral task in which the force signal of the rat's forelimb paw was generated. Our results show that PLS regression and Kalman filters with the mean performance of 0.75 and 0.72 in terms of the correlation coefficient (CC) and 0.37 and 0.48 in terms of normalized mean square error (NMSE), respectively, are effective methods for decoding the force parameter from LFPs. Kalman filter underperforms PLS both in performance and speed. Although adding nonlinearity to the Kalman filter results in equally accurate CC performance as PLS, it has even more computational cost. Therefore, it is inferred that nonlinear methods do not necessarily have better functionality than linear ones and PLS, as a simple fast linear method could be an effectively applicable regression technique for BCIs.</p>","PeriodicalId":55430,"journal":{"name":"Australasian Physical & Engineering Sciences in Medicine","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2020-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Force decoding using local field potentials in primary motor cortex: PLS or Kalman filter regression?\",\"authors\":\"Nargess Heydari Beni, Reza Foodeh, Vahid Shalchyan, Mohammad Reza Daliri\",\"doi\":\"10.1007/s13246-019-00833-7\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The development of brain-computer interface (BCI) systems is an important approach in brain studies. Control of communication devices and prostheses in real-world scenarios requires complex movement parameters. Decoding a variety of neural signals captured by micro-wire arrays is a potential applicant for extracting movement-related information. The present work was conducted to compare the functionality of partial least square (PLS) regression and Kalman filter to predict the force parameter from local field potential (LFP) signals of the primary motor cortex (M1). The signals were recorded using a 16-channel micro-wire array from the forelimb-related area of the M1 of three rats performing a behavioral task in which the force signal of the rat's forelimb paw was generated. Our results show that PLS regression and Kalman filters with the mean performance of 0.75 and 0.72 in terms of the correlation coefficient (CC) and 0.37 and 0.48 in terms of normalized mean square error (NMSE), respectively, are effective methods for decoding the force parameter from LFPs. Kalman filter underperforms PLS both in performance and speed. Although adding nonlinearity to the Kalman filter results in equally accurate CC performance as PLS, it has even more computational cost. Therefore, it is inferred that nonlinear methods do not necessarily have better functionality than linear ones and PLS, as a simple fast linear method could be an effectively applicable regression technique for BCIs.</p>\",\"PeriodicalId\":55430,\"journal\":{\"name\":\"Australasian Physical & Engineering Sciences in Medicine\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-01-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Australasian Physical & Engineering Sciences in Medicine\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s13246-019-00833-7\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Australasian Physical & Engineering Sciences in Medicine","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s13246-019-00833-7","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
Force decoding using local field potentials in primary motor cortex: PLS or Kalman filter regression?
The development of brain-computer interface (BCI) systems is an important approach in brain studies. Control of communication devices and prostheses in real-world scenarios requires complex movement parameters. Decoding a variety of neural signals captured by micro-wire arrays is a potential applicant for extracting movement-related information. The present work was conducted to compare the functionality of partial least square (PLS) regression and Kalman filter to predict the force parameter from local field potential (LFP) signals of the primary motor cortex (M1). The signals were recorded using a 16-channel micro-wire array from the forelimb-related area of the M1 of three rats performing a behavioral task in which the force signal of the rat's forelimb paw was generated. Our results show that PLS regression and Kalman filters with the mean performance of 0.75 and 0.72 in terms of the correlation coefficient (CC) and 0.37 and 0.48 in terms of normalized mean square error (NMSE), respectively, are effective methods for decoding the force parameter from LFPs. Kalman filter underperforms PLS both in performance and speed. Although adding nonlinearity to the Kalman filter results in equally accurate CC performance as PLS, it has even more computational cost. Therefore, it is inferred that nonlinear methods do not necessarily have better functionality than linear ones and PLS, as a simple fast linear method could be an effectively applicable regression technique for BCIs.
期刊介绍:
Australasian Physical & Engineering Sciences in Medicine (APESM) is a multidisciplinary forum for information and research on the application of physics and engineering to medicine and human physiology. APESM covers a broad range of topics that include but is not limited to:
- Medical physics in radiotherapy
- Medical physics in diagnostic radiology
- Medical physics in nuclear medicine
- Mathematical modelling applied to medicine and human biology
- Clinical biomedical engineering
- Feature extraction, classification of EEG, ECG, EMG, EOG, and other biomedical signals;
- Medical imaging - contributions to new and improved methods;
- Modelling of physiological systems
- Image processing to extract information from images, e.g. fMRI, CT, etc.;
- Biomechanics, especially with applications to orthopaedics.
- Nanotechnology in medicine
APESM offers original reviews, scientific papers, scientific notes, technical papers, educational notes, book reviews and letters to the editor.
APESM is the journal of the Australasian College of Physical Scientists and Engineers in Medicine, and also the official journal of the College of Biomedical Engineers, Engineers Australia and the Asia-Oceania Federation of Organizations for Medical Physics.