双utr -一种新的合成生物学应用的5'非翻译区设计。

IF 2.6 Q2 BIOCHEMICAL RESEARCH METHODS Synthetic biology (Oxford, England) Pub Date : 2020-06-08 eCollection Date: 2020-01-01 DOI:10.1093/synbio/ysaa006
Simone Balzer Le, Ingerid Onsager, Jon Andreas Lorentzen, Rahmi Lale
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引用次数: 0

摘要

细菌mRNA的5'非翻译区(UTR)参与基因表达的复杂调控;然而,基因调控的确切序列特征尚不完全清楚。在这项研究中,我们利用单个表达盒中5' UTR的转录和翻译特性,设计了一种新的5' UTR,即双UTR。双UTR由两个5' UTR组成,每个单独导致报告基因的转录或翻译增加,它们被间隔区隔开,从而实现从头开始翻译。我们合理地创建了具有广泛表达谱的双utr,并使用不同的启动子系统和编码序列在大肠杆菌和恶臭假单胞菌中展示了新设计概念的功能。总的来说,我们展示了双UTR设计概念在各种合成生物学应用中的应用潜力,从基因表达的微调到蛋白质生产的最大化。
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Dual UTR-A novel 5' untranslated region design for synthetic biology applications.

Bacterial 5' untranslated regions of mRNA (UTR) involve in a complex regulation of gene expression; however, the exact sequence features contributing to gene regulation are not yet fully understood. In this study, we report the design of a novel 5' UTR, dual UTR, utilizing the transcriptional and translational characteristics of 5' UTRs in a single expression cassette. The dual UTR consists of two 5' UTRs, each separately leading to either increase in transcription or translation of the reporter, that are separated by a spacer region, enabling de novo translation initiation. We rationally create dual UTRs with a wide range of expression profiles and demonstrate the functionality of the novel design concept in Escherichia coli and Pseudomonas putida using different promoter systems and coding sequences. Overall, we demonstrate the application potential of dual UTR design concept in various synthetic biology applications ranging from fine-tuning of gene expression to maximization of protein production.

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