hat家族转座酶TcBuster催化三联体的功能分析

IF 1.8 4区 生物学 Q3 GENETICS & HEREDITY Plasmid Pub Date : 2021-03-01 DOI:10.1016/j.plasmid.2021.102554
Lauren E. Woodard , Felisha M. Williams , Isria C. Jarrett , Matthew H. Wilson
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引用次数: 0

摘要

TcBuster是一种hat家族DNA转座子,来自红粉甲虫Tribolium castaneum。TcBuster转座酶在昆虫和哺乳动物细胞中高度活跃,是基因组工程研究的热点。为了测试预测的TcBuster催化三联体,将血凝素标记的TcBuster转座酶的催化三联体的每个残基单独突变为一个结构保守的氨基酸。通过对转座子整合的耐药集落试验,我们发现TcBuster转座酶的D223N、D289N和E589Q突变体在人细胞中无活性。我们使用改良的染色质免疫沉淀法来确定每个突变体与TcBuster转座子反向重复元件的结合。虽然催化突变体保留了转座子结合特性,但突变体在人类细胞中的表达和定位发生了改变。没有一个催化突变体形成典型的TcBuster转座酶小棒状结构,D223N和D289N突变体无法通过免疫荧光显微镜检测到。免疫印迹分析表明,E589Q突变体的丰度低于野生型TcBuster转座酶。转染TcBuster或TcBuster- e589q转座酶的细胞通过结构照明显微镜成像,以量化转座酶小棒长度的差异。TcBuster转座酶(N = 39)的平均长度为3.284 μm, E589Q转座酶(N = 33)的平均长度为1.157 μm。0.0001;t检验)。催化三联体突变降低了总蛋白质水平,破坏了转座酶小棒的形成,同时维持了核定位和DNA与倒置重复元件的结合。我们的结果可能对观察到的DNA转座子的过度生产抑制现象具有更广泛的意义。
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Functional analysis of the catalytic triad of the hAT-family transposase TcBuster

TcBuster is a hAT-family DNA transposon from the red flour beetle, Tribolium castaneum. The TcBuster transposase is of interest for genome engineering as it is highly active in insect and mammalian cells. To test the predicted catalytic triad of TcBuster, each residue of the catalytic triad of a haemagglutinin-tagged TcBuster transposase was individually mutated to a structurally conserved amino acid. Using a drug-resistant colony assay for transposon integration, we found that the D223N, D289N, and E589Q mutants of TcBuster transposase were inactive in human cells. We used a modified chromatin immunoprecipitation assay to determine that each mutant maintained binding to TcBuster transposon inverted repeat elements. Although the catalytic mutants retained their transposon binding properties, mutants displayed altered expression and localization in human cells. None of the catalytic mutants formed characteristic TcBuster transposase rodlet structures, and the D223N and D289N mutants were not able to be detected by immunofluorescence microscopy. Immunoblot analysis demonstrated that the E589Q mutant is less abundant than wild-type TcBuster transposase. Cells transfected with either TcBuster or TcBuster-E589Q transposase were imaged by structured illumination microscopy to quantify differences in the length of the transposase rodlets. The average length of the TcBuster transposase rodlets (N = 39) was 3.284 μm while the E589Q rodlets (N = 33) averaged 1.157 μm (p < 0.0001; t-test). The catalytic triad mutations decreased overall protein levels and disrupted transposase rodlet formation while nuclear localization and DNA binding to the inverted repeat elements were maintained. Our results may have broader implications for the overproduction inhibition phenomenon observed for DNA transposons.

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来源期刊
Plasmid
Plasmid 生物-遗传学
CiteScore
4.70
自引率
3.80%
发文量
21
审稿时长
53 days
期刊介绍: Plasmid publishes original research on genetic elements in all kingdoms of life with emphasis on maintenance, transmission and evolution of extrachromosomal elements. Objects of interest include plasmids, bacteriophages, mobile genetic elements, organelle DNA, and genomic and pathogenicity islands.
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