应用生物信息学和分子动力学模拟方法鉴定具有潜在改善热稳定性的成纤维细胞生长因子10类似物。

IF 1.8 4区 生物学 Q4 CELL BIOLOGY Growth factors Pub Date : 2020-06-01 DOI:10.1080/08977194.2021.1881501
Ali Akbar Alizadeh, Behzad Jafari, Siavoush Dastmalchi
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引用次数: 0

摘要

成纤维细胞生长因子10作为旁分泌间充质分子,启动与细胞发育和健康有关的信号通路。然而,低热稳定性限制了它在人体中的功能和基于fgf10的配方的保质期。本研究旨在通过合理的设计和生物信息学的方法来发现一些可能改善FGF10热稳定性的点突变。生物信息学分析结果显示,N105D、C106F、K144R、K153M和I156R是潜在的稳定性突变。所鉴定的突变体进行了MD模拟,表明所有突变体在结构和能量上都是有利的。最后,对鉴定的突变对FGF10受体结合的影响进行了预测,结果表明,相对于野生型,K144R和K153M突变可能会增加FGF10受体的结合亲和力。目前的研究结果为进一步的实验研究提供了潜在的改进的FGF10类似物。
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Application of bioinformatics and molecular dynamics simulation approaches for identification of fibroblast growth factor 10 analogues with potentially improved thermostability.

Fibroblast growth factor 10 functions as a paracrine mesenchymal molecule to initiate signalling pathways regarding to cellular development and health. However, the low thermal stability restricts it's functionality in the human body and the shelf-life of FGF10-based formulations. The current study aimed to employ rational design and bioinformatics approaches to identify some point mutations which may improve the thermal stability of FGF10. Bioinformatics analyses resulted in N105D, C106F, K144R, K153M and I156R as the potential stability conferring mutations. The identified mutants were subjected to MD simulation indicating that all mutations are both structurally and energetically favoured. Finally, the effects of the identified mutations on receptor binding of FGF10 were predicted and the results showed that K144R and K153M mutations may increase the binding affinity relative to the wild type. The findings of the current study propose potentially improved FGF10 analogues for further experimental investigations.

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来源期刊
Growth factors
Growth factors 生物-内分泌学与代谢
CiteScore
2.60
自引率
0.00%
发文量
20
审稿时长
>12 weeks
期刊介绍: Growth Factors is an international and interdisciplinary vehicle publishing new knowledge and findings on the regulators of cell proliferation, differentiation and survival. The Journal will publish research papers, short communications and reviews on current developments in cell biology, biochemistry, physiology or pharmacology of growth factors, cytokines or hormones which improve our understanding of biology or medicine. Among the various fields of study topics of particular interest include: •Stem cell biology •Growth factor physiology •Structure-activity relationships •Drug development studies •Clinical applications
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