Allison L Naleway, Bradley Crane, Stephanie A Irving, Don Bachman, Kimberly K Vesco, Matthew F Daley, Darios Getahun, Sungching C Glenn, Simon J Hambidge, Lisa A Jackson, Nicola P Klein, Natalie L McCarthy, David L McClure, Lakshmi Panagiotakopoulos, Catherine A Panozzo, Gabriela Vazquez-Benitez, Eric S Weintraub, Ousseny Zerbo, Elyse O Kharbanda
{"title":"疫苗安全数据链基础设施增强,用于评估孕产妇接种疫苗的安全性。","authors":"Allison L Naleway, Bradley Crane, Stephanie A Irving, Don Bachman, Kimberly K Vesco, Matthew F Daley, Darios Getahun, Sungching C Glenn, Simon J Hambidge, Lisa A Jackson, Nicola P Klein, Natalie L McCarthy, David L McClure, Lakshmi Panagiotakopoulos, Catherine A Panozzo, Gabriela Vazquez-Benitez, Eric S Weintraub, Ousseny Zerbo, Elyse O Kharbanda","doi":"10.1177/20420986211021233","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Identifying pregnancy episodes and accurately estimating their beginning and end dates are imperative for observational maternal vaccine safety studies using electronic health record (EHR) data.</p><p><strong>Methods: </strong>We modified the Vaccine Safety Datalink (VSD) Pregnancy Episode Algorithm (PEA) to include both the International Classification of Disease, ninth revision (ICD-9 system) and ICD-10 diagnosis codes, incorporated additional gestational age data, and validated this enhanced algorithm with manual medical record review. We also developed the new Dynamic Pregnancy Algorithm (DPA) to identify pregnancy episodes in real time.</p><p><strong>Results: </strong>Around 75% of the pregnancy episodes identified by the enhanced VSD PEA were live births, 12% were spontaneous abortions (SABs), 10% were induced abortions (IABs), and 0.4% were stillbirths (SBs). Gestational age was identified for 99% of live births, 89% of SBs, 69% of SABs, and 42% of IABs. Agreement between the PEA-assigned and abstractor-identified pregnancy outcome and outcome date was 100% for live births, but was lower for pregnancy losses. When gestational age was available in the medical record, the agreement was higher for live births (97%), but lower for pregnancy losses (75%). The DPA demonstrated strong concordance with the PEA and identified pregnancy episodes ⩾6 months prior to the outcome date for 89% of live births.</p><p><strong>Conclusion: </strong>The enhanced VSD PEA is a useful tool for identifying pregnancy episodes in EHR databases. The DPA improves the timeliness of pregnancy identification and can be used for near real-time maternal vaccine safety studies.</p><p><strong>Plain language summary: </strong><b>Improving identification of pregnancies in the Vaccine Safety Datalink electronic medical record databases to allow for better and faster monitoring of vaccination safety during pregnancy</b> <b>Introduction:</b> It is important to monitor of the safety of vaccines after they have been approved and licensed by the Food and Drug Administration, especially among women vaccinated during pregnancy. The Vaccine Safety Datalink (VSD) monitors vaccine safety through observational studies within large databases of electronic medical records. Since 2012, VSD researchers have used an algorithm called the Pregnancy Episode Algorithm (PEA) to identify the medical records of women who have been pregnant. Researchers then use these medical records to study whether receiving a particular vaccine is linked to any negative outcomes for the woman or her child.<b>Methods:</b> The goal of this study was to update and enhance the PEA to include the full set of medical record diagnostic codes [both from the older International Classification of Disease, ninth revision (ICD-9 system) and the newer ICD-10 system] and to incorporate additional sources of data about gestational age. To ensure the validity of the PEA following these enhancements, we manually reviewed medical records and compared the results with the algorithm. We also developed a new algorithm, the Dynamic Pregnancy Algorithm (DPA), to identify women earlier in pregnancy, allowing us to conduct more timely vaccine safety assessments.<b>Results:</b> The new version of the PEA identified 2,485,410 pregnancies in the VSD database. The enhanced algorithm more precisely estimated the beginning of pregnancies, especially those that did not result in live births, due to the new sources of gestational age data.<b>Conclusion:</b> Our new algorithm, the DPA, was successful at identifying pregnancies earlier in gestation than the PEA. The enhanced PEA and the new DPA will allow us to better evaluate the safety of current and future vaccinations administered during or around the time of pregnancy.</p>","PeriodicalId":23012,"journal":{"name":"Therapeutic Advances in Drug Safety","volume":"12 ","pages":"20420986211021233"},"PeriodicalIF":3.4000,"publicationDate":"2021-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/dc/2b/10.1177_20420986211021233.PMC8207278.pdf","citationCount":"0","resultStr":"{\"title\":\"Vaccine Safety Datalink infrastructure enhancements for evaluating the safety of maternal vaccination.\",\"authors\":\"Allison L Naleway, Bradley Crane, Stephanie A Irving, Don Bachman, Kimberly K Vesco, Matthew F Daley, Darios Getahun, Sungching C Glenn, Simon J Hambidge, Lisa A Jackson, Nicola P Klein, Natalie L McCarthy, David L McClure, Lakshmi Panagiotakopoulos, Catherine A Panozzo, Gabriela Vazquez-Benitez, Eric S Weintraub, Ousseny Zerbo, Elyse O Kharbanda\",\"doi\":\"10.1177/20420986211021233\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Identifying pregnancy episodes and accurately estimating their beginning and end dates are imperative for observational maternal vaccine safety studies using electronic health record (EHR) data.</p><p><strong>Methods: </strong>We modified the Vaccine Safety Datalink (VSD) Pregnancy Episode Algorithm (PEA) to include both the International Classification of Disease, ninth revision (ICD-9 system) and ICD-10 diagnosis codes, incorporated additional gestational age data, and validated this enhanced algorithm with manual medical record review. We also developed the new Dynamic Pregnancy Algorithm (DPA) to identify pregnancy episodes in real time.</p><p><strong>Results: </strong>Around 75% of the pregnancy episodes identified by the enhanced VSD PEA were live births, 12% were spontaneous abortions (SABs), 10% were induced abortions (IABs), and 0.4% were stillbirths (SBs). Gestational age was identified for 99% of live births, 89% of SBs, 69% of SABs, and 42% of IABs. Agreement between the PEA-assigned and abstractor-identified pregnancy outcome and outcome date was 100% for live births, but was lower for pregnancy losses. When gestational age was available in the medical record, the agreement was higher for live births (97%), but lower for pregnancy losses (75%). The DPA demonstrated strong concordance with the PEA and identified pregnancy episodes ⩾6 months prior to the outcome date for 89% of live births.</p><p><strong>Conclusion: </strong>The enhanced VSD PEA is a useful tool for identifying pregnancy episodes in EHR databases. The DPA improves the timeliness of pregnancy identification and can be used for near real-time maternal vaccine safety studies.</p><p><strong>Plain language summary: </strong><b>Improving identification of pregnancies in the Vaccine Safety Datalink electronic medical record databases to allow for better and faster monitoring of vaccination safety during pregnancy</b> <b>Introduction:</b> It is important to monitor of the safety of vaccines after they have been approved and licensed by the Food and Drug Administration, especially among women vaccinated during pregnancy. The Vaccine Safety Datalink (VSD) monitors vaccine safety through observational studies within large databases of electronic medical records. Since 2012, VSD researchers have used an algorithm called the Pregnancy Episode Algorithm (PEA) to identify the medical records of women who have been pregnant. Researchers then use these medical records to study whether receiving a particular vaccine is linked to any negative outcomes for the woman or her child.<b>Methods:</b> The goal of this study was to update and enhance the PEA to include the full set of medical record diagnostic codes [both from the older International Classification of Disease, ninth revision (ICD-9 system) and the newer ICD-10 system] and to incorporate additional sources of data about gestational age. To ensure the validity of the PEA following these enhancements, we manually reviewed medical records and compared the results with the algorithm. We also developed a new algorithm, the Dynamic Pregnancy Algorithm (DPA), to identify women earlier in pregnancy, allowing us to conduct more timely vaccine safety assessments.<b>Results:</b> The new version of the PEA identified 2,485,410 pregnancies in the VSD database. The enhanced algorithm more precisely estimated the beginning of pregnancies, especially those that did not result in live births, due to the new sources of gestational age data.<b>Conclusion:</b> Our new algorithm, the DPA, was successful at identifying pregnancies earlier in gestation than the PEA. 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引用次数: 0
摘要
背景:使用电子健康记录(EHR)数据进行孕产妇疫苗安全性观察研究时,必须识别妊娠事件并准确估计其开始和结束日期:方法:我们修改了疫苗安全数据链(VSD)妊娠期事件算法(PEA),将国际疾病分类第九版(ICD-9 系统)和 ICD-10 诊断代码都包括在内,纳入了额外的妊娠年龄数据,并通过人工病历审查验证了这一增强算法。我们还开发了新的动态妊娠算法(DPA)来实时识别妊娠事件:结果:VSD PEA 增强版识别出的妊娠事件中,约 75% 为活产,12% 为自然流产 (SAB),10% 为人工流产 (IAB),0.4% 为死产 (SB)。99% 的活产、89% 的 SB、69% 的 SAB 和 42% 的 IAB 均已确定胎龄。在活产婴儿中,PEA 指定的妊娠结果与文摘员确定的妊娠结果日期之间的一致性为 100%,但在妊娠丢失婴儿中,两者之间的一致性较低。如果病历中提供了胎龄,则活产的一致性更高(97%),但流产的一致性较低(75%)。DPA 与 PEA 的一致性很高,89% 的活产婴儿在结果日期前 6 个月⩾发生妊娠:结论:增强型 VSD PEA 是在电子病历数据库中识别妊娠事件的有用工具。DPA 提高了妊娠识别的及时性,可用于近乎实时的孕产妇疫苗安全性研究。 简明摘要:改进疫苗安全数据链接电子病历数据库中的妊娠识别,以便更好、更快地监测孕期疫苗接种的安全性:在疫苗获得美国食品药品管理局批准和许可后,对其安全性进行监测非常重要,尤其是在孕期接种疫苗的妇女中。疫苗安全数据链(Vaccine Safety Datalink,VSD)通过大型电子病历数据库中的观察性研究来监测疫苗的安全性。自 2012 年起,VSD 的研究人员开始使用一种名为 "妊娠事件算法"(PEA)的算法来识别怀孕妇女的医疗记录。然后,研究人员利用这些医疗记录来研究接种特定疫苗是否与妇女或其子女的任何不良后果有关:本研究的目标是更新和增强 PEA,使其包含全套医疗记录诊断代码(既包括较早的《国际疾病分类》第九版(ICD-9 系统),也包括较新的《国际疾病分类》第 10 版系统),并纳入有关孕龄的其他数据来源。为了确保 PEA 在这些改进后的有效性,我们人工审核了医疗记录,并将结果与算法进行了比较。我们还开发了一种新算法--动态妊娠算法 (DPA),以识别妊娠早期的妇女,使我们能够更及时地进行疫苗安全性评估:结果:新版 PEA 在 VSD 数据库中识别出 2,485,410 名孕妇。由于有了新的胎龄数据来源,增强版算法更精确地估计了妊娠的开始时间,尤其是那些没有导致活产的妊娠:结论:与 PEA 相比,我们的新算法 DPA 能成功识别妊娠早期的孕妇。增强的 PEA 和新的 DPA 将使我们能够更好地评估当前和未来在妊娠期或妊娠期前后接种疫苗的安全性。
Vaccine Safety Datalink infrastructure enhancements for evaluating the safety of maternal vaccination.
Background: Identifying pregnancy episodes and accurately estimating their beginning and end dates are imperative for observational maternal vaccine safety studies using electronic health record (EHR) data.
Methods: We modified the Vaccine Safety Datalink (VSD) Pregnancy Episode Algorithm (PEA) to include both the International Classification of Disease, ninth revision (ICD-9 system) and ICD-10 diagnosis codes, incorporated additional gestational age data, and validated this enhanced algorithm with manual medical record review. We also developed the new Dynamic Pregnancy Algorithm (DPA) to identify pregnancy episodes in real time.
Results: Around 75% of the pregnancy episodes identified by the enhanced VSD PEA were live births, 12% were spontaneous abortions (SABs), 10% were induced abortions (IABs), and 0.4% were stillbirths (SBs). Gestational age was identified for 99% of live births, 89% of SBs, 69% of SABs, and 42% of IABs. Agreement between the PEA-assigned and abstractor-identified pregnancy outcome and outcome date was 100% for live births, but was lower for pregnancy losses. When gestational age was available in the medical record, the agreement was higher for live births (97%), but lower for pregnancy losses (75%). The DPA demonstrated strong concordance with the PEA and identified pregnancy episodes ⩾6 months prior to the outcome date for 89% of live births.
Conclusion: The enhanced VSD PEA is a useful tool for identifying pregnancy episodes in EHR databases. The DPA improves the timeliness of pregnancy identification and can be used for near real-time maternal vaccine safety studies.
Plain language summary: Improving identification of pregnancies in the Vaccine Safety Datalink electronic medical record databases to allow for better and faster monitoring of vaccination safety during pregnancyIntroduction: It is important to monitor of the safety of vaccines after they have been approved and licensed by the Food and Drug Administration, especially among women vaccinated during pregnancy. The Vaccine Safety Datalink (VSD) monitors vaccine safety through observational studies within large databases of electronic medical records. Since 2012, VSD researchers have used an algorithm called the Pregnancy Episode Algorithm (PEA) to identify the medical records of women who have been pregnant. Researchers then use these medical records to study whether receiving a particular vaccine is linked to any negative outcomes for the woman or her child.Methods: The goal of this study was to update and enhance the PEA to include the full set of medical record diagnostic codes [both from the older International Classification of Disease, ninth revision (ICD-9 system) and the newer ICD-10 system] and to incorporate additional sources of data about gestational age. To ensure the validity of the PEA following these enhancements, we manually reviewed medical records and compared the results with the algorithm. We also developed a new algorithm, the Dynamic Pregnancy Algorithm (DPA), to identify women earlier in pregnancy, allowing us to conduct more timely vaccine safety assessments.Results: The new version of the PEA identified 2,485,410 pregnancies in the VSD database. The enhanced algorithm more precisely estimated the beginning of pregnancies, especially those that did not result in live births, due to the new sources of gestational age data.Conclusion: Our new algorithm, the DPA, was successful at identifying pregnancies earlier in gestation than the PEA. The enhanced PEA and the new DPA will allow us to better evaluate the safety of current and future vaccinations administered during or around the time of pregnancy.
期刊介绍:
Therapeutic Advances in Drug Safety delivers the highest quality peer-reviewed articles, reviews, and scholarly comment on pioneering efforts and innovative studies pertaining to the safe use of drugs in patients.
The journal has a strong clinical and pharmacological focus and is aimed at clinicians and researchers in drug safety, providing a forum in print and online for publishing the highest quality articles in this area. The editors welcome articles of current interest on research across all areas of drug safety, including therapeutic drug monitoring, pharmacoepidemiology, adverse drug reactions, drug interactions, pharmacokinetics, pharmacovigilance, medication/prescribing errors, risk management, ethics and regulation.