人类对深海海绵地基的影响:应用环境组学进行监测。

3区 生物学 Q1 Agricultural and Biological Sciences Advances in Marine Biology Pub Date : 2021-01-01 Epub Date: 2021-09-16 DOI:10.1016/bs.amb.2021.08.004
Johanne Vad, Kelsey Archer Barnhill, Georgios Kazanidis, J Murray Roberts
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引用次数: 4

摘要

海绵(多孔动物门)是现存最古老的后生动物。在深海中,海绵可以高密度地出现,形成被称为海绵地的栖息地。海绵地可以扩展到数百平方公里的大片区域,是生物多样性的热点。然而,随着人类活动(包括深水碳氢化合物开采)不断扩展到海绵栖息地,了解人为影响如何影响海绵及其在多个生物尺度(群落、个体和(亚)细胞水平)上提供的生态系统服务是实现可持续管理的关键。本章(1)对《海洋生物学进展》第79卷题为“海上石油和天然气活动对深海海绵及其形成的栖息地的潜在影响”的章节进行了更新,(2)讨论了组学作为深海生态系统监测的未来工具的使用。近年来,宏基因组学和(元)转录组学研究有助于提高我们对海绵生物学的理解,而代谢组学分析主要用于鉴定天然产物。因此,尽管代谢组是基因型和表型之间的关键联系,但海绵代谢组仍然是未知的,为我们提供了一个独特的新见解,了解生态系统的关键组成部分是如何运作的。作为释放到海水中的代谢组的一部分,海绵外代谢组在比较环境代谢组学研究中才刚刚开始被表征。然而,海绵外代谢组构成了鉴定海绵健康生物标志物的独特机会,因为化合物可以在海水中测量,而不需要在深海中仍然难以收集的物理样品。在海绵土壤中,共享海绵外代谢组的特征可能导致生态系统功能和整体健康的生物标志物的鉴定。在建立环境监测组学方法方面仍然存在挑战,但不断的技术进步和成本的降低意味着这些技术将在未来得到广泛应用。
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Human impacts on deep-sea sponge grounds: Applying environmental omics to monitoring.

Sponges (Phylum Porifera) are the oldest extant Metazoans. In the deep sea, sponges can occur at high densities forming habitats known as sponge grounds. Sponge grounds can extend over large areas of up to hundreds of km2 and are biodiversity hotspots. However, as human activities, including deep-water hydrocarbon extraction, continue to expand into areas harbouring sponge grounds, understanding how anthropogenic impacts affect sponges and the ecosystem services they provide at multiple biological scales (community, individual and (sub)cellular levels) is key for achieving sustainable management. This chapter (1) provides an update to the chapter of Advances in Marine Biology Volume 79 entitled "Potential Impacts of Offshore Oil and Gas Activities on Deep-Sea Sponges and the Habitats They Form" and (2) discusses the use of omics as a future tool for deep-sea ecosystem monitoring. While metagenomics and (meta)transcriptomics studies have contributed to improve our understanding of sponge biology in recent years, metabolomics analysis has mostly been used to identify natural products. The sponge metabolome, therefore, remains vastly unknown despite the fact that the metabolome is a key link between the genotype and phenotype, giving us a unique new insight to how key components of an ecosystem are functioning. As the fraction of the metabolome released into the seawater, the sponge exometabolome has only just started to be characterised in comparative environmental metabolomic studies. Yet, the sponge exometabolome constitute a unique opportunity for the identification of biomarkers of sponge health as compounds can be measured in seawater, bypassing the need for physical samples which can still be difficult to collect in the deep sea. Within sponge grounds, the characterisation of a shared sponge exometabolome could lead to the identification of biomarkers of ecosystem functioning and overall health. Challenges remain in establishing omics approaches in environmental monitoring but constant technological advances and reduction in costs means these techniques will become widely available in the future.

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来源期刊
Advances in Marine Biology
Advances in Marine Biology MARINE & FRESHWATER BIOLOGY-
CiteScore
6.10
自引率
0.00%
发文量
6
审稿时长
12 months
期刊介绍: Advances in Marine Biology was first published in 1963 under the founding editorship of Sir Frederick S. Russell, FRS. Now edited by Charles Sheppard, the serial publishes in-depth and up-to-date reviews on a wide range of topics which will appeal to postgraduates and researchers in marine biology, fisheries science, ecology, zoology and biological oceanography. Eclectic volumes in the series are supplemented by thematic volumes on such topics as The Biology of Calanoid Copepods.
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