单细胞RNA测序在癌症研究中理解细胞特征和功能表型的谨慎应用。

Xuanhao Xu, Zemin Zhang
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引用次数: 1

摘要

近十年来,在高通量单细胞技术领域取得了显著进展。单细胞RNA测序(scRNA-seq)已被证明是研究临床样本异质性的有力策略,提供了一种无偏倚的方法来揭示不同细胞亚群的特征。为了确保生物学发现的可重复性和稳健性,研究人员需要意识到组织分离、细胞捕获和转录本测量中隐藏的警告,这些警告可能会影响细胞成分评估和细胞功能注释。通过对数据的精确解释以及实验和技术方法的创新,scRNA-seq可以极大地揭示复杂系统中的异质性,并提高我们对组织稳态和癌症生物学的理解。
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Prudent application of single-cell RNA sequencing in understanding cellular features and functional phenotypes in cancer studies.

This decade has seen remarkable advances in the field of high-throughput single cell techniques. Single-cell RNA sequencing (scRNA-seq) has proven to be a powerful strategy to study the heterogeneity in clinical samples, providing an unbiased approach to uncover the characteristics in different cell subsets. To ensure the reproducibility and robustness of biological discoveries, researchers need to be aware of hidden caveats in tissue dissociation, cell capturing and transcripts measurement which may affect cell composition assessment and cellular function annotation. With measured interpretation of data and innovations in experimental and technical approaches, scRNA-seq can greatly unravel the heterogeneity in complex system and improve our understandings in tissue homeostasis and cancer biology.

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