甘蓝型油菜耐冷性相关转录因子基因的研究。

Q2 Agricultural and Biological Sciences Genomics and Informatics Pub Date : 2021-12-01 Epub Date: 2021-12-31 DOI:10.5808/gi.21055
Mayur Mukut Murlidhar Sharma, Rahul Vasudeo Ramekar, Nam-Il Park, Ik-Young Choi, Seon-Kang Choi, Kyong-Cheul Park
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引用次数: 1

摘要

甘蓝型油菜是世界上第三重要的油料作物;然而,在韩国,它受冷胁迫的影响很大,限制了种子的生长和生产。植物已经发展出特定的胁迫反应,一般分为三类:冷胁迫信号、转录/转录后调控和胁迫反应机制。当冷胁迫触发时,大量的功能和调节蛋白参与了这些过程。在这里,我们的目的是研究不同的遗传因素参与甘蓝型油菜的冷胁迫反应。因此,我们在不同条件下对韩国甘蓝型油菜品种Naehan进行了4周的低温处理,并获得了RNA和cDNA。一项计算机分析包括从国家生物技术信息中心(NCBI)数据库下载的80个冷反应基因。通过逆转录聚合酶链反应评估表达水平,在冷胁迫条件下鉴定出14个冷触发基因。最重要的基因编码锌指蛋白(33.7%),其次是MYB转录因子(7.5%)。今后,我们将选择适合提高甘蓝型油菜耐寒性的基因。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Characterization of transcription factor genes related to cold tolerance in Brassica napus.
Brassica napus is the third most important oilseed crop in the world; however, in Korea, it is greatly affected by cold stress, limiting seed growth and production. Plants have developed specific stress responses that are generally divided into three categories: cold-stress signaling, transcriptional/post-transcriptional regulation, and stress-response mechanisms. Large numbers of functional and regulatory proteins are involved in these processes when triggered by cold stress. Here, our objective was to investigate the different genetic factors involved in the cold-stress responses of B. napus. Consequently, we treated the Korean B. napus cultivar Naehan at the 4-week stage in cold chambers under different conditions, and RNA and cDNA were obtained. An in silico analysis included 80 cold-responsive genes downloaded from the National Center for Biotechnology Information (NCBI) database. Expression levels were assessed by reverse transcription polymerase chain reaction, and 14 cold-triggered genes were identified under cold-stress conditions. The most significant genes encoded zinc-finger proteins (33.7%), followed by MYB transcription factors (7.5%). In the future, we will select genes appropriate for improving the cold tolerance of B. napus.
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来源期刊
Genomics and Informatics
Genomics and Informatics Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
1.90
自引率
0.00%
发文量
0
审稿时长
12 weeks
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