{"title":"桃李shaker -型K+通道基因的全基因组鉴定与特性分析类等。","authors":"Yong Yang, Jinlong Han, Yue Zhang, Shizhuo Lin, Meixia Liang, Lizi Zhao, Zhizhong Song","doi":"10.1155/2022/5053838","DOIUrl":null,"url":null,"abstract":"<div>\n <p>Shaker-type K<sup>+</sup> channels are critical for plant K<sup>+</sup> acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K<sup>+</sup> channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K<sup>+</sup> channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K<sup>+</sup> channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various <i>cis</i>-acting regulatory elements were detected in the promoter region of the shaker-type K<sup>+</sup> channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K<sup>+</sup> channel genes were expressed differentially in distinct tissues, and <i>PpSPIK</i> was specifically expressed in the full-bloom flowers; <i>PpKAT1</i> and <i>PpGORK</i> were predominantly expressed in the leaves, while <i>PpAKT1</i>, <i>PpKC1</i>, and <i>PpSKOR</i> were majorly expressed in the roots. The peach shaker K<sup>+</sup> channel genes were differentially regulated by abiotic stresses in that K<sup>+</sup> deficiency, and ABA treatment mainly increased the shaker K<sup>+</sup> channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K<sup>+</sup> channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K<sup>+</sup> channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K<sup>+</sup> channel genes in peach and provides a theoretical foundation for K<sup>+</sup> nutrition and balance research in fruit trees.</p>\n </div>","PeriodicalId":55239,"journal":{"name":"Comparative and Functional Genomics","volume":"2022 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genome-Wide Identification and Characterization of the Shaker-Type K+ Channel Genes in Prunus persica (L.) Batsch\",\"authors\":\"Yong Yang, Jinlong Han, Yue Zhang, Shizhuo Lin, Meixia Liang, Lizi Zhao, Zhizhong Song\",\"doi\":\"10.1155/2022/5053838\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n <p>Shaker-type K<sup>+</sup> channels are critical for plant K<sup>+</sup> acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K<sup>+</sup> channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K<sup>+</sup> channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K<sup>+</sup> channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various <i>cis</i>-acting regulatory elements were detected in the promoter region of the shaker-type K<sup>+</sup> channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K<sup>+</sup> channel genes were expressed differentially in distinct tissues, and <i>PpSPIK</i> was specifically expressed in the full-bloom flowers; <i>PpKAT1</i> and <i>PpGORK</i> were predominantly expressed in the leaves, while <i>PpAKT1</i>, <i>PpKC1</i>, and <i>PpSKOR</i> were majorly expressed in the roots. The peach shaker K<sup>+</sup> channel genes were differentially regulated by abiotic stresses in that K<sup>+</sup> deficiency, and ABA treatment mainly increased the shaker K<sup>+</sup> channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K<sup>+</sup> channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K<sup>+</sup> channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K<sup>+</sup> channel genes in peach and provides a theoretical foundation for K<sup>+</sup> nutrition and balance research in fruit trees.</p>\\n </div>\",\"PeriodicalId\":55239,\"journal\":{\"name\":\"Comparative and Functional Genomics\",\"volume\":\"2022 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-03-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Comparative and Functional Genomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1155/2022/5053838\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Comparative and Functional Genomics","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1155/2022/5053838","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Genome-Wide Identification and Characterization of the Shaker-Type K+ Channel Genes in Prunus persica (L.) Batsch
Shaker-type K+ channels are critical for plant K+ acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K+ channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K+ channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K+ channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K+ channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K+ channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K+ channel genes were differentially regulated by abiotic stresses in that K+ deficiency, and ABA treatment mainly increased the shaker K+ channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K+ channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K+ channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K+ channel genes in peach and provides a theoretical foundation for K+ nutrition and balance research in fruit trees.