揭示肺腺癌中Xklp2和Aurora-A激酶共表达靶向蛋白的潜在靶向治疗机会。

IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biotechnology Pub Date : 2024-10-01 Epub Date: 2023-09-28 DOI:10.1007/s12033-023-00879-9
Arnab Mukherjee, Preeti Harigovind Yadav, K S Mukunthan
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引用次数: 0

摘要

肺腺癌(LUAD)是全球癌症死亡最常见和最主要的原因之一,其诊断和临床意义有限。识别参与LUAD发展和进展的基因和过程对于开发有效的靶向治疗方法和改善患者预后至关重要。因此,本研究旨在探索癌症基因组图谱(TCGA)中LUAD的RNA测序数据,以及基因表达综合数据库(GEO)中涉及GSE10072、GSE31210和GSE32863的基因表达谱数据集。差异基因表达和下游分析使用基于网络的方法确定了具有临床意义的生物标志物。这些治疗靶点主要富集了有丝分裂细胞周期调节的失调,并揭示了Aurora-A激酶(AURKA)和Xklp2靶向蛋白(TPX2)在LUAD患者中的共同过表达,具有高生存风险。AURKA-TPX2相互作用的疏水性残基被认为是在有丝分裂细胞周期中阻断AURKA自磷酸化的靶位点。酪氨酸激酶抑制剂(TKI)达科米替尼显示出强大的结合潜力,可以阻碍TPX2,屏蔽AURKA的不稳定。这项计算机研究为重新调整靶向治疗方案的用途奠定了基础,以阻止LUAD进展中的蛋白质-蛋白质相互作用(PPIs),并有助于未来的转化研究。
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Unveiling Potential Targeted Therapeutic Opportunities for Co-Overexpressed Targeting Protein for Xklp2 and Aurora-A Kinase in Lung Adenocarcinoma.

Lung adenocarcinoma (LUAD) is one of the most prevalent and leading causes of cancer deaths globally, with limited diagnostic and clinically significant therapeutic targets. Identifying the genes and processes involved in developing and progressing LUAD is crucial for developing effective targeted therapeutics and improving patient outcomes. Therefore, the study aimed to explore the RNA sequencing data of LUAD from The Cancer Genome Atlas (TCGA) and gene expression profile datasets involving GSE10072, GSE31210, and GSE32863 from the Gene Expression Omnibus (GEO) databases. The differential gene expression and the downstream analysis determined clinically significant biomarkers using a network-based approach. These therapeutic targets predominantly enriched the dysregulation of mitotic cell cycle regulation and revealed the co-overexpression of Aurora-A Kinase (AURKA) and Targeting Protein for Xklp2 (TPX2) with high survival risk in LUAD patients. The hydrophobic residues of the AURKA-TPX2 interaction were considered as the target site to block the autophosphorylation of AURKA during the mitotic cell cycle. The tyrosine kinase inhibitor (TKI) dacomitinib demonstrated the strong binding potential to hinder TPX2, shielding the AURKA destabilization. This in silico study lays the foundation for repurposing targeted therapeutic options to impede the Protein-Protein Interactions (PPIs) in LUAD progression and aid in future translational investigations.

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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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