个性化免疫治疗的机器学习建模-评估模块。

Xiaonan Ying, Biaoru Li
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摘要

免疫细胞疗法和靶向疗法在治疗肿瘤疾病方面发展迅速。然而,目前的免疫细胞治疗和靶向免疫治疗通常面临三个挑战(三个S):安全性挑战,如细胞因子释放综合征(C.R.S.);特异性靶向问题,例如由非靶向肿瘤细胞引起的低疗效;不令人满意的支付令临床患者和医生感到困惑。我们研究免疫疗法已经有三十多年了,最近有人提出了治疗肿瘤疾病的个性化免疫疗法。在我们从肿瘤微环境中的免疫细胞中发现静止基因后,我们建立了单细胞基因组学分析,研究了多种肿瘤抗原(neo抗原)的异质性免疫反应;在这里,我们进一步介绍了新一代的免疫治疗模块,通过使用机器学习模型来评估最佳免疫治疗。结合单细胞基因组分析的机器学习模型可以预测患者使用的最佳免疫细胞(如T细胞)和其他最佳靶向药物,如PD1和CTLA4抑制剂。
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Machine-learning Modeling for Personalized Immunotherapy- An Evaluation Module.

Immune-cell therapy and targeting therapy are in rapid development to treat tumor diseases. However, current immune-cell therapy and targeting immunotherapy often face three challenges (three Ss): safety challenges such as cytokine releasing syndrome (C.R.S.); specificity targeting problems such as low efficacy caused by off-targeting tumor cells; unsatisfying payment are confounded to clinical patients and physicians. We have been studying immunotherapy for more than thirty years, and recently, personalized immunotherapy to treat tumor disease has been proposed. After we discovered quiescent genes from immune cells within the tumor microenvironment, we set up single-cell genomics analysis, studying heterogeneous immune responses from multiple tumor antigens (neo-antigen); here, we further introduce a new generation of immunotherapy module by using a machine-learning model to assess optimal immunotherapy. The machine-learning model combined with single-cell genomic analysis can predict optimal immune-cell (such as T-cells) and other optimal targeting drugs such as PD1 and CTLA4 inhibitors for the patient to use.

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Machine-learning Modeling for Personalized Immunotherapy- An Evaluation Module.
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