结构域结构和蛋白质-蛋白质相互作用调节KDM5A向染色质的募集。

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Epigenetics Pub Date : 2023-12-01 Epub Date: 2023-10-15 DOI:10.1080/15592294.2023.2268813
Avishek Kataria, Shweta Tyagi
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引用次数: 0

摘要

组蛋白3赖氨酸4(H3K4)的三甲基化是一种重要的表观遗传学修饰,其沉积和去除可以在结构和功能水平上影响染色质。KDM5A是已知的四种H3K4特异性去甲基化酶之一。它是KDM5家族的一部分,其特征在于能够去除H3K4二甲基化和三甲基化标记的催化Jumonji结构域。KDM5A已被发现参与多种细胞过程,如分化、代谢、细胞周期和转录。它与包括癌症在内的各种疾病的联系使KDM5A成为药物开发的重要靶点。然而,尽管有几项研究概述了它在各种途径中的意义,但我们对它在染色质靶位点的募集和功能缺乏了解,这对创造有效和靶向的治疗方法提出了挑战。因此,有必要了解KDM5A对染色质的募集机制及其活性,以理解KDM5A的各种作用是如何被调节的。在这篇综述中,我们讨论了KDM5A如何以上下文依赖的方式在染色质上发挥作用,无论是直接通过其结构域,还是通过各种相互作用的伴侣,以实现各种各样的功能。
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Domain architecture and protein-protein interactions regulate KDM5A recruitment to the chromatin.

Tri-methylation of Histone 3 lysine 4 (H3K4) is an important epigenetic modification whose deposition and removal can affect the chromatin at structural and functional levels. KDM5A is one of the four known H3K4-specific demethylases. It is a part of the KDM5 family, which is characterized by a catalytic Jumonji domain capable of removing H3K4 di- and tri-methylation marks. KDM5A has been found to be involved in multiple cellular processes such as differentiation, metabolism, cell cycle, and transcription. Its link to various diseases, including cancer, makes KDM5A an important target for drug development. However, despite several studies outlining its significance in various pathways, our lack of understanding of its recruitment and function at the target sites on the chromatin presents a challenge in creating effective and targeted treatments. Therefore, it is essential to understand the recruitment mechanism of KDM5A to chromatin, and its activity therein, to comprehend how various roles of KDM5A are regulated. In this review, we discuss how KDM5A functions in a context-dependent manner on the chromatin, either directly through its structural domain, or through various interacting partners, to bring about a diverse range of functions.

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来源期刊
Epigenetics
Epigenetics 生物-生化与分子生物学
CiteScore
6.80
自引率
2.70%
发文量
82
审稿时长
3-8 weeks
期刊介绍: Epigenetics publishes peer-reviewed original research and review articles that provide an unprecedented forum where epigenetic mechanisms and their role in diverse biological processes can be revealed, shared, and discussed. Epigenetics research studies heritable changes in gene expression caused by mechanisms others than the modification of the DNA sequence. Epigenetics therefore plays critical roles in a variety of biological systems, diseases, and disciplines. Topics of interest include (but are not limited to): DNA methylation Nucleosome positioning and modification Gene silencing Imprinting Nuclear reprogramming Chromatin remodeling Non-coding RNA Non-histone chromosomal elements Dosage compensation Nuclear organization Epigenetic therapy and diagnostics Nutrition and environmental epigenetics Cancer epigenetics Neuroepigenetics
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