Leydis Luna Torres, Neyder Contreras Puentes, Antistio Avíz Amador
{"title":"对EGFR (T790M和l858R突变)具有潜在活性的奥西替尼和达科替尼类似物用于非小细胞肺癌治疗的虚拟筛选","authors":"Leydis Luna Torres, Neyder Contreras Puentes, Antistio Avíz Amador","doi":"10.32997/rcb-2021-3666","DOIUrl":null,"url":null,"abstract":"\n \n \nIntroduction: Tyrosine kinase inhibitors (TKIs) drugs act on epidermal growth factor (EGFR) receptors to treat Non-small cell lung cancer (NSCLC). However, mutations on EGFR receptors T790M and L858R allow just a global response rate (GRR) of 80% with Osimertinib, while Erlotinib and Gefitinib only 10%. \nObjective: To identify promising molecules analogues to tyrosine kinase inhibitor (TKIs) drugs with the potential capacity to bind the native and mutated EGFR receptor (T790M and L858R) to avoid mutational resistance in NSCLC. \nMethods: Virtual screening by molecular docking between analogues of Osimertinib (DB09330) and Dacomitinib (DB11963) drugs retrieved of DRUGBANK database and receptors of native EGFR and mutated on L585R and T790M obtained of Protein Data Bank was performed, using PyRx software. Finally, toxicological prediction was made using GUSAR. \nResults: Analogues studied, DB03878, DB04739, DB07280 and DB06876 achieved significant affinity (-9,1 y -8,3 Kcal/mol) on mutated T790M EGFR compared with osimertinib (-7,6 Kcal/mol). Similarly, DB08091, DB08730, DB07220 and DB06920 achieved significant affinity (between 9.4 and -8.9 Kcal/mol) on L858R EGFR mutated compared with dacomitinib (-7.0 Kcal/mol). Overall, there were predominance of Van der Waals forces and links π-alkyl. Also, two analogues were safe with category IV according to predictions, DB08730 and DB03878. \nConclusions: Eight TKI analogues showed superior binding energy over EGFR compared to reference drugs. According to toxicological predictions only 2 analogues were selected as promising TKI-type safe candidates for the treatment of resistant NSCLC. \n \n \n","PeriodicalId":34802,"journal":{"name":"Revista Ciencias Biomedicas","volume":"1 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Virtual screening of Osimertinib and Dacomitinib Analogues with potential activity on EGFR (T790M and l858R Mutations) for non-small cell lung cancer treatment\",\"authors\":\"Leydis Luna Torres, Neyder Contreras Puentes, Antistio Avíz Amador\",\"doi\":\"10.32997/rcb-2021-3666\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n \\n \\nIntroduction: Tyrosine kinase inhibitors (TKIs) drugs act on epidermal growth factor (EGFR) receptors to treat Non-small cell lung cancer (NSCLC). However, mutations on EGFR receptors T790M and L858R allow just a global response rate (GRR) of 80% with Osimertinib, while Erlotinib and Gefitinib only 10%. \\nObjective: To identify promising molecules analogues to tyrosine kinase inhibitor (TKIs) drugs with the potential capacity to bind the native and mutated EGFR receptor (T790M and L858R) to avoid mutational resistance in NSCLC. \\nMethods: Virtual screening by molecular docking between analogues of Osimertinib (DB09330) and Dacomitinib (DB11963) drugs retrieved of DRUGBANK database and receptors of native EGFR and mutated on L585R and T790M obtained of Protein Data Bank was performed, using PyRx software. Finally, toxicological prediction was made using GUSAR. \\nResults: Analogues studied, DB03878, DB04739, DB07280 and DB06876 achieved significant affinity (-9,1 y -8,3 Kcal/mol) on mutated T790M EGFR compared with osimertinib (-7,6 Kcal/mol). Similarly, DB08091, DB08730, DB07220 and DB06920 achieved significant affinity (between 9.4 and -8.9 Kcal/mol) on L858R EGFR mutated compared with dacomitinib (-7.0 Kcal/mol). Overall, there were predominance of Van der Waals forces and links π-alkyl. Also, two analogues were safe with category IV according to predictions, DB08730 and DB03878. \\nConclusions: Eight TKI analogues showed superior binding energy over EGFR compared to reference drugs. According to toxicological predictions only 2 analogues were selected as promising TKI-type safe candidates for the treatment of resistant NSCLC. \\n \\n \\n\",\"PeriodicalId\":34802,\"journal\":{\"name\":\"Revista Ciencias Biomedicas\",\"volume\":\"1 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-10-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Revista Ciencias Biomedicas\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.32997/rcb-2021-3666\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Revista Ciencias Biomedicas","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.32997/rcb-2021-3666","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
摘要
简介:酪氨酸激酶抑制剂(TKIs)药物作用于表皮生长因子(EGFR)受体治疗非小细胞肺癌(NSCLC)。然而,EGFR受体T790M和L858R的突变使奥西替尼的整体缓解率(GRR)仅为80%,而厄洛替尼和吉非替尼仅为10%。目的:寻找有希望的酪氨酸激酶抑制剂(TKIs)药物类似物分子,这些分子具有结合天然和突变EGFR受体(T790M和L858R)的潜在能力,以避免NSCLC的突变耐药。方法:利用PyRx软件,将DRUGBANK数据库中检索到的奥西替尼(DB09330)和达科替尼(DB11963)药物类似物与Protein Data Bank中获得的L585R和T790M突变的EGFR受体进行分子对接虚拟筛选。最后利用GUSAR进行毒理学预测。结果:与奥西替尼(-7,6 Kcal/mol)相比,DB03878、DB04739、DB07280和DB06876对突变的T790M EGFR具有显著的亲和力(-9,1 y -8,3 Kcal/mol)。同样,与dacomitinib (-7.0 Kcal/mol)相比,DB08091、DB08730、DB07220和DB06920对突变的L858R EGFR具有显著的亲和力(在9.4 ~ -8.9 Kcal/mol之间)。总的来说,范德华力和π-烷基键占主导地位。此外,根据预测,DB08730和DB03878两种类似物在IV类中是安全的。结论:与参比药物相比,8种TKI类似物具有优于EGFR的结合能。根据毒理学预测,只有2种类似物被选为治疗耐药NSCLC的有希望的tki型安全候选物。
Virtual screening of Osimertinib and Dacomitinib Analogues with potential activity on EGFR (T790M and l858R Mutations) for non-small cell lung cancer treatment
Introduction: Tyrosine kinase inhibitors (TKIs) drugs act on epidermal growth factor (EGFR) receptors to treat Non-small cell lung cancer (NSCLC). However, mutations on EGFR receptors T790M and L858R allow just a global response rate (GRR) of 80% with Osimertinib, while Erlotinib and Gefitinib only 10%.
Objective: To identify promising molecules analogues to tyrosine kinase inhibitor (TKIs) drugs with the potential capacity to bind the native and mutated EGFR receptor (T790M and L858R) to avoid mutational resistance in NSCLC.
Methods: Virtual screening by molecular docking between analogues of Osimertinib (DB09330) and Dacomitinib (DB11963) drugs retrieved of DRUGBANK database and receptors of native EGFR and mutated on L585R and T790M obtained of Protein Data Bank was performed, using PyRx software. Finally, toxicological prediction was made using GUSAR.
Results: Analogues studied, DB03878, DB04739, DB07280 and DB06876 achieved significant affinity (-9,1 y -8,3 Kcal/mol) on mutated T790M EGFR compared with osimertinib (-7,6 Kcal/mol). Similarly, DB08091, DB08730, DB07220 and DB06920 achieved significant affinity (between 9.4 and -8.9 Kcal/mol) on L858R EGFR mutated compared with dacomitinib (-7.0 Kcal/mol). Overall, there were predominance of Van der Waals forces and links π-alkyl. Also, two analogues were safe with category IV according to predictions, DB08730 and DB03878.
Conclusions: Eight TKI analogues showed superior binding energy over EGFR compared to reference drugs. According to toxicological predictions only 2 analogues were selected as promising TKI-type safe candidates for the treatment of resistant NSCLC.