髋关节发育不良易感基因的综合生物信息学分析。

IF 1.1 Q2 MEDICINE, GENERAL & INTERNAL Intractable & rare diseases research Pub Date : 2022-05-01 DOI:10.5582/irdr.2022.01043
Wei-chuan Yang, Guiyang Jin, Keying Qian, Chao Zhang, W. Zhi, Dan Yang, Yan-qin Lu, Jinxiang Han
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引用次数: 2

摘要

发育性髋关节发育不良(DDH)是一种多因素疾病,在环境和遗传的影响下发生。DDH的发病机制尚未得到充分解释。随着研究的进展,许多候选基因已被发现与DDH的发生密切相关。本研究采用生物信息学方法对16个DDH易感基因进行了全面检测。COL1A1编码I型胶原的前α1链,I型胶原是骨细胞外基质(ECM)的主要蛋白质成分。显示与COL1A1最具统计学意义的共表达连接的基因是ASPN、TGFB1、DKK1、IL-6、TENM3和GDF5。DKK1、FRZB和WISP3是Wnt信号通路的组成部分。CX3CR1和GDF5通过经典的Wnt信号通路调节软骨形成。ASPN可通过与胶原和钙的结合诱导胶原矿化。综合生物信息学分析表明,ECM、Wnt信号通路和TGF-β信号通路参与了DDH的发生。为进一步探讨DDH的发病机制提供了依据。
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Comprehensive bioinformatics analysis of susceptibility genes for developmental dysplasia of the hip.
Developmental dysplasia of the hip (DDH) is a multifactorial disease, which occurs under environmental and genetic influence. The etiopathogenesis of DDH has not been fully explained. As research progresses, many candidate genes have been found to be closely related to the occurrence of DDH. In this study, we comprehensively examined 16 susceptibility genes of DDH using bioinformatics. COL1A1 encodes the pro-alpha1 chains of type I collagen, which is the major protein component of the bone extracellular matrix (ECM). The genes displaying the most statistically significant co-expression link to COL1A1 are ASPN, TGFB1, DKK1, IL-6, TENM3 and GDF5. DKK1, FRZB and WISP3 are components of the Wnt signaling pathway. CX3CR1 and GDF5 regulate chondrogenesis through the canonical Wnt signaling pathway. ASPN could induce collagen mineralization through binding with collagen and calcium. Integrated bioinformatics analysis indicates that ECM, Wnt signaling pathway and TGF-β signaling pathway are involved in the occurrence of DDH. These provide a basis for further exploring the pathogenesis of DDH.
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来源期刊
Intractable & rare diseases research
Intractable & rare diseases research MEDICINE, GENERAL & INTERNAL-
CiteScore
2.10
自引率
0.00%
发文量
29
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