基于网络药理学和分子对接的苍术抗新冠肺炎作用机制

Jiachuan Lei, Yi-jun Tu, Jie Xu, Jianqing Yu
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引用次数: 0

摘要

苍术。(AL)已被证明对2019冠状病毒病(新冠肺炎)的治疗有效。在本研究中,TCMSP、TCMID、OMIM、GeneCards、PharmMapper和SwissTargetPrediction用于收集AL对抗新冠肺炎的潜在靶点。在线STRING分析平台和Cytoscape用于生成(蛋白质-蛋白质相互作用)PPI网络。Cytoscape和Autodock软件用于确定枢纽基因和关键化合物。通过DAVID数据库进行基因本体论(GO)和京都基因和基因组百科全书(KEGG)途径富集分析。共获得84个共同靶标。抗病毒途径是traetment的主要途径。CytoHubba筛选出10个hub基因和关键化合物。我们发现AL2、AL6和AL38与关键蛋白的结合能较低。我们的研究表明,AL可以通过改善“细胞因子风暴”、调节一些抗病毒途径和抑制SARS-CoV-2入侵宿主细胞的关键蛋白来治疗新冠肺炎。这些发现为AL治疗新冠肺炎提供了药理基础和支持。
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Mechanisms of the Traditional Chinese Herb Atractylodes lancea against COVID-19 Based on Network Pharmacology and Molecular Docking
Atractylodes lancea (Thunb.) DC. (AL) has been proven to be effective in the treatment of coronavirus disease 2019 (COVID-19). In this study, TCMSP, TCMID, OMIM, GeneCards, PharmMapper and SwissTargetPrediction were used to collect potential targets for AL against COVID-19. The online STRING analysis platform and Cytoscape were used for generating a (protein-protein interaction) PPI network. The Cytoscape and Autodock software were used for determining hub genes and key compounds. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were performed via DAVID database. A total of 84 common targets were obtained. The antiviral pathways were main pathways in traetment. 10 hub genes and key compounds were screened by CytoHubba. We found that AL2, AL6 and AL38 had lower binding energy with key proteins. Our study demonstrated that AL might be used to treat COVID-19 by improving the "cytokine storm", regulating some antiviral pathways, and inhibiting the key protein through which the SARS-CoV-2 invades the host cell. These findings give a pharmacological basis and support for treating COVID-19 with AL.
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Wuhan University Journal of Natural Sciences
Wuhan University Journal of Natural Sciences Multidisciplinary-Multidisciplinary
CiteScore
0.40
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0.00%
发文量
2485
期刊介绍: Wuhan University Journal of Natural Sciences aims to promote rapid communication and exchange between the World and Wuhan University, as well as other Chinese universities and academic institutions. It mainly reflects the latest advances being made in many disciplines of scientific research in Chinese universities and academic institutions. The journal also publishes papers presented at conferences in China and abroad. The multi-disciplinary nature of Wuhan University Journal of Natural Sciences is apparent in the wide range of articles from leading Chinese scholars. This journal also aims to introduce Chinese academic achievements to the world community, by demonstrating the significance of Chinese scientific investigations.
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