DNA甲基化在铁超载的藏族人中起着重要作用。

IF 1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Genes & genetic systems Pub Date : 2022-05-28 DOI:10.1266/ggs.21-00006
Qin Zhao, Zhijing Ge, Suhong Fu, Shan Wan, Jing Shi, Yunhong Wu, Yongqun Zhang
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引用次数: 3

摘要

藏族铁超载患病率高于汉族。DNA甲基化(DNAm)与铁代谢和铁水平密切相关。然而,铁过载藏人的表观遗传学状况尚不清楚,因此我们旨在探索在藏人群体中观察到的现象是否受表观遗传学的调节。结果显示,全基因组中2.26%的胞嘧啶被甲基化,并且铁过载(TH)组的CG胞嘧啶甲基化率高于铁正常(TL)组。我们分析了高海拔藏族TH和TL群体亚硫酸氢盐全基因组测序数据中的差异甲基化基因(DMG)。与铁摄取和转运相关的候选DMG的蛋白质-蛋白质相互作用和通路分析表明,10个候选基因(ACO1、CYBRD1、FLVCR1、HFE、HMOX2、IREB2、NEDD8、SLC11A2、SLC40A1和TFRC)的表观遗传学变化可能与铁过载有关。这项工作首次揭示了铁过载藏族人群DNAm的变化,这表明DNAm是高海拔藏族人群个体间铁含量差异的潜在机制。我们的发现应该有助于研究铁代谢和藏人的整体健康状况。
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DNA methylation plays an important role in iron-overloaded Tibetans.
The prevalence of iron overload in Tibetans in Tibet is higher than that in Han. DNA methylation (DNAm) is closely related to iron metabolism and iron level. Nevertheless, the epigenetic status of Tibetans with iron overload is unknown, and we therefore aimed to explore whether the phenomenon observed in the Tibetan population is regulated by epigenetics. The results showed that 2.26% of cytosine was methylated in the whole genome, and that the rate of CG cytosine methylation was higher in individuals in the iron overload (TH) group than in those in the iron normal (TL) group. We analyzed differentially methylated genes (DMGs) in whole-genome bisulfite sequencing data from the TH and TL groups of high-altitude Tibetans. Protein-protein interaction and pathway analyses of candidate DMGs related to iron uptake and transport showed that epigenetic changes in 10 candidate genes (ACO1, CYBRD1, FLVCR1, HFE, HMOX2, IREB2, NEDD8, SLC11A2, SLC40A1 and TFRC) are likely to relate to iron overload. This work reveals, for the first time, changes of DNAm in Tibetan people with iron overload, which suggest that DNAm is a mechanism underlying differences in iron content between individuals in the high-altitude Tibetan population. Our findings should contribute to the study of iron metabolism and the overall health status of Tibetans.
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来源期刊
Genes & genetic systems
Genes & genetic systems 生物-生化与分子生物学
CiteScore
1.50
自引率
0.00%
发文量
22
审稿时长
>12 weeks
期刊介绍: Genes & Genetic Systems , formerly the Japanese Journal of Genetics , is published bimonthly by the Genetics Society of Japan.
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