湖南常绿木本藤本植物五味子科(Kadsura coccinea)的遗传多样性和群体遗传结构

IF 1.3 4区 农林科学 Q3 FORESTRY Journal of Forest Research Pub Date : 2023-06-06 DOI:10.1080/13416979.2023.2220192
Jian-Wen Zou, Run-Hua He, Hong-xin Rao, Xian-Quan Luo, Ling Chen
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引用次数: 0

摘要

摘要:南五味子是原产于东南亚和中国南方的一种常绿木本藤本植物,在医药、食品和观赏园艺方面有着巨大的前景。近二十年来,由于不合理的采果和采根,其自然资源急剧减少,这可能导致其遗传资源受到严重侵蚀,尤其是在中国湖南省。本文从湖南省11个自然种群中采集了406个球虫个体,利用17个多态性微卫星标记对其进行了遗传变异分析。共扩增出163个等位基因,平均每个位点9.588个等位位点。这些群体的每个位点的平均有效等位基因数、等位基因丰富度和预期杂合度平均分别为2.910、4.171和0.558,表明遗传多样性水平有点低。群体间分化(FST)占总遗传变异的13.63%,分子方差分析也表明群体间存在13.38%的遗传变异,代表着较高的遗传分化和有限的基因流(Nm = 1.813)。贝叶斯聚类分析和邻居连接聚类分析的结果表明,群体GD和YZ是特定的,CB和HT被分配到一个聚类中。mantel检验表明,群体间的成对FST揭示的遗传距离与地理距离显著相关。这是首次利用分子标记对南五味子属植物的遗传多样性进行研究,为南五味子属的遗传资源保护和育种提供了基础。
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Genetic diversity and population genetic structure in Kadsura coccinea (Schisandraceae), an evergreen woody vine from Hunan, China
ABSTRACT Kadsura coccinea is an evergreen woody vine species indigenous to Southeast Asia and south China with great promise in medicine, food, and ornamental gardening. Its natural resources have decreased dramatically due to irrational fruits and roots harvesting in two decades recently, which may result in heavy erosion of its genetic resources, especially in Hunan Province, China. Here 406 individuals of K. coccinea were collected from 11 natural populations in Hunan Province, and were analyzed for genetic variation using 17 polymorphic microsatellite markers. A total of 163 alleles were amplified with a mean of 9.588 alleles per locus. The mean effective number of alleles per locus, allele richness and the expected heterozygosity of these populations were 2.910, 4.171 and 0.558 on average, respectively, indicating a bit low level of genetic diversity. The among-population differentiation (FST) accounted for 13.63% of the total genetic variation, and analysis of molecular variance also showed 13.38% of genetic variation existed among populations, representing a high genetic differentiation and a bit limited gene flow (Nm = 1.813) among these populations. The results of Bayesian clustering analysis and neighbor-joining clustering analysis showed that populations GD and YZ were specific, and CB and HT were assigned into a cluster. The mantel test demonstrated that the genetic distances revealed by pairwise FST between populations were remarkably correlated to geographic distances. It is the first report on genetic diversity of species in genus Kadsura using molecular markers, and the findings provide fundamental base for genetic resources conservation and breeding of this species.
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来源期刊
Journal of Forest Research
Journal of Forest Research 农林科学-林学
CiteScore
3.00
自引率
6.70%
发文量
62
审稿时长
3 months
期刊介绍: Journal of Forest Research publishes original articles, reviews, and short communications. It covers all aspects of forest research, both basic and applied, with the aim of encouraging international communication between scientists in different fields who share a common interest in forest science.
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