骆驼肾皮质盐和水剥夺应激的关键基因差异表达及通路

IF 2.946 Q3 Biochemistry, Genetics and Molecular Biology BMC Molecular Biology Pub Date : 2019-04-08 DOI:10.1186/s12867-019-0129-8
Yu Cao, Dong Zhang, Huanmin Zhou
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引用次数: 6

摘要

由于长期适应沙漠生活环境,骆驼具有耐盐、耐旱的特点。关于骆驼耐药转录组的研究很少,而且缺乏,特别是在肾皮质的重吸收。非编码RNA通常被认为是不被翻译成蛋白质的RNA分子,它们目前的作用主要是调节从DNA到蛋白质的信息流动,进而影响正常的生命活动和疾病。为了首次揭开我们所知的肾皮质ncrna转录后调控的神秘面纱,我们设计并开展了骆驼盐胁迫和缺水胁迫实验。通过对阿拉山双峰驼(Camelus bactrianus)肾皮质的rna测序,我们发现了一些显著差异的rna,包括盐胁迫下4个新的lncRNAs、11个miRNAs和13个mrna,缺水胁迫下0个lncRNAs、18个miRNAs和14个mrna。通过数据分析,提出了盐和水剥夺胁迫转录后调控的响应途径,包括miR-193b、miR-542-5p与SLC6A19 mRNA相互作用,阻止钠进入细胞、净化水和补偿中性氨基酸。我们基于耐药相关的lncRNAs、miRNAs、mrna,首次从肾皮质ncRNAs调控水平提出转录后调控通路,解释骆驼对盐和水剥夺应激的反应,希望为治疗类似人类高血压的疾病提供理论依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Key genes differential expressions and pathway involved in salt and water-deprivation stresses for renal cortex in camel

Camels possess the characteristics of salt- and drought-resistances, due to the long-time adaption to the living environment in desert. The camel resistance research on transcriptome is rare and deficient, especially reabsorption in renal cortex. Non-coding RNAs are normally considered as the RNA molecules that are not translated into proteins, their current roles remain mostly in regulation of information flux from DNA to protein, further on normal life activities and diseases. In order to reveal the mysterious veil of the post-transcriptional regulation of ncRNAs in renal cortex for the first time as far as we know, we designed and carried out the experiment of salt stress and water-deprivation stress in camel.

By means of RNA-seq in renal cortex of Alxa Bactrian Camel (Camelus bactrianus), we identified certain significantly differential RNAs, including 4 novel lncRNAs, 11 miRNAs and 13 mRNAs under salt stress, 0 lncRNAs, 18 miRNAs and 14 mRNAs under water-deprivation stress. By data analysis, the response pathway of post-transcriptional regulation concerning salt and water-deprivation stresses was put forward, involving preventing sodium from entering the cell, purifying of water and compensating neutral amino acids by miR-193b, miR-542-5p interaction with SLC6A19 mRNA.

Based on the resistance-related lncRNAs, miRNAs, and mRNAs, we proposed the post-transcriptional regulation pathway to explain how camels respond to salt and water-deprivation stresses in the ncRNAs regulation level of renal cortex for the first time, thus hoping to provide a theoretical basis for therapy of disease that is similar to high blood pressure in humans.

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来源期刊
BMC Molecular Biology
BMC Molecular Biology 生物-生化与分子生物学
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
>12 weeks
期刊介绍: BMC Molecular Biology is an open access journal publishing original peer-reviewed research articles in all aspects of DNA and RNA in a cellular context, encompassing investigations of chromatin, replication, recombination, mutation, repair, transcription, translation and RNA processing and function.
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