基于傅立叶视觉提示的无源无监督域医学图像分割

IF 8.9 1区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS IEEE Transactions on Medical Imaging Pub Date : 2023-04-26 DOI:10.48550/arXiv.2304.13672
Yan Wang, Jian Cheng, Yixin Chen, Shuai Shao, Lanyun Zhu, Zhenzhou Wu, T. Liu, Haogang Zhu
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引用次数: 1

摘要

当训练和测试数据之间存在域偏移时,医学图像分割方法通常表现不佳。无监督域自适应(UDA)通过使用来自源域的标记数据和来自目标域的未标记数据来训练模型来解决域偏移问题。由于数据隐私或数据传输问题,最近为UDA提出了无源UDA(SFUDA),而在自适应过程中不需要源数据,这通常会在测试阶段自适应预先训练的深度模型。然而,在医学图像分割的真实临床场景中,训练的模型通常在测试阶段被冻结。在本文中,我们提出了用于医学图像分割的SFUDA的傅立叶视觉提示(FVP)。受自然语言处理中提示学习的启发,FVP通过在输入目标数据中添加视觉提示,引导冻结的预训练模型在目标域中表现良好。在FVP中,视觉提示仅使用输入频率空间中的少量低频可学习参数进行参数化,并通过最小化提示目标图像的预测分割和冻结模型下目标图像的可靠伪分割标签之间的分割损失来学习。据我们所知,FVP是第一个将视觉提示应用于SFUDA进行医学图像分割的工作。使用三个公共数据集验证了所提出的FVP,实验表明,与现有的各种方法相比,FVP产生了更好的分割结果。
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FVP: Fourier Visual Prompting for Source-Free Unsupervised Domain Adaptation of Medical Image Segmentation
Medical image segmentation methods normally perform poorly when there is a domain shift between training and testing data. Unsupervised Domain Adaptation (UDA) addresses the domain shift problem by training the model using both labeled data from the source domain and unlabeled data from the target domain. Source-Free UDA (SFUDA) was recently proposed for UDA without requiring the source data during the adaptation, due to data privacy or data transmission issues, which normally adapts the pre-trained deep model in the testing stage. However, in real clinical scenarios of medical image segmentation, the trained model is normally frozen in the testing stage. In this paper, we propose Fourier Visual Prompting (FVP) for SFUDA of medical image segmentation. Inspired by prompting learning in natural language processing, FVP steers the frozen pre-trained model to perform well in the target domain by adding a visual prompt to the input target data. In FVP, the visual prompt is parameterized using only a small amount of low-frequency learnable parameters in the input frequency space, and is learned by minimizing the segmentation loss between the predicted segmentation of the prompted target image and reliable pseudo segmentation label of the target image under the frozen model. To our knowledge, FVP is the first work to apply visual prompts to SFUDA for medical image segmentation. The proposed FVP is validated using three public datasets, and experiments demonstrate that FVP yields better segmentation results, compared with various existing methods.
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来源期刊
IEEE Transactions on Medical Imaging
IEEE Transactions on Medical Imaging 医学-成像科学与照相技术
CiteScore
21.80
自引率
5.70%
发文量
637
审稿时长
5.6 months
期刊介绍: The IEEE Transactions on Medical Imaging (T-MI) is a journal that welcomes the submission of manuscripts focusing on various aspects of medical imaging. The journal encourages the exploration of body structure, morphology, and function through different imaging techniques, including ultrasound, X-rays, magnetic resonance, radionuclides, microwaves, and optical methods. It also promotes contributions related to cell and molecular imaging, as well as all forms of microscopy. T-MI publishes original research papers that cover a wide range of topics, including but not limited to novel acquisition techniques, medical image processing and analysis, visualization and performance, pattern recognition, machine learning, and other related methods. The journal particularly encourages highly technical studies that offer new perspectives. By emphasizing the unification of medicine, biology, and imaging, T-MI seeks to bridge the gap between instrumentation, hardware, software, mathematics, physics, biology, and medicine by introducing new analysis methods. While the journal welcomes strong application papers that describe novel methods, it directs papers that focus solely on important applications using medically adopted or well-established methods without significant innovation in methodology to other journals. T-MI is indexed in Pubmed® and Medline®, which are products of the United States National Library of Medicine.
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