在粗放型绵羊养殖系统中,与放牧和反刍时间相关的加速度计传感器获得的性状的可重复性和遗传性

IF 2.1 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Frontiers in animal science Pub Date : 2023-07-05 DOI:10.3389/fanim.2023.1154797
F. Almasi, M. Stear, M. Khansefid, H. Nguyen, A. Desai, J. Pryce
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引用次数: 1

摘要

引言牲畜表型测量的自动化收集对研究人员和农民都很感兴趣。实时、低成本和准确的表型分析可以提高牲畜的精确管理,并可以优化牧场利用和繁殖高效动物。可穿戴传感器为研究人员提供了在所有生产系统中开发新表型的工具,这对放牧条件尤其有价值。本研究的目的是估计与放牧和反刍活动相关的性状的可重复性和遗传力,以及它们与其他性状的相关性。方法本研究于2020年5月4日至5月29日在澳大利亚维多利亚州西部的一个商业梅里诺农场进行。当10–11个月大的美利奴羊(M=74,F=86)在牧场上放牧时,共有160个嵌入笼头的ActiGraph传感器连接在它们的嘴左侧。支持向量机(SVM)算法将传感器输出分类为放牧、反刍、行走、空闲和其他活动。这些活动进一步分为每日放牧时间(GT)、放牧次数(NGE)、放牧长度(GL)、反刍时间(RT)、反刍次数(NRE)、反刍长度(RL)、行走时间(WT)和空闲时间(IT)。使用ASReml SA中的单变量和双变量模型对数据进行分析,以估计性状之间的重复性、遗传力和表型相关性。结果GT的遗传力估计为0.44±0.23,而其他性状的遗传力则接近于零。所有性状的估计重复性为中高,GT的估计值最高(0.70±0.03),RT的估计值最低(0.44±0.03)。所有性状在1天间隔(即连续2天)的组内相关性或重复性都很高,当测量间隔超过1周时,组内相关性和重复性稳步降低。讨论放牧性状的可重复性估计表明,可穿戴传感器和SVM方法是记录绵羊在牧场上活动的可靠方法,在选择性育种动物排名中具有潜在应用价值。
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The repeatability and heritability of traits derived from accelerometer sensors associated with grazing and rumination time in an extensive sheep farming system
Introduction The automated collection of phenotypic measurements in livestock is of interest to both researchers and farmers. Real-time, low-cost, and accurate phenotyping can enhance precision livestock management and could lead to the optimized utilization of pasture and breeding of efficient animals. Wearable sensors provide the tools for researchers to develop novel phenotypes across all production systems, which is especially valuable for grazing conditions. The objectives of this study were to estimate the repeatability and heritability of traits related to grazing and rumination activities and their correlations with other traits. Methods This study was conducted on a commercial Merino farm in the west of Victoria, Australia, from 4 May 2020 to 29 May 2020. A total of 160 ActiGraph sensors embedded in halters were attached to the left side of the muzzles of Merino sheep (M = 74, F = 86) aged 10–11 months while the sheep were grazing on pasture. Support vector machine (SVM) algorithms classified the sensor output into the categories of grazing, rumination, walking, idle, and other activities. These activities were further classified into daily grazing time (GT), number of grazing events (NGE), grazing length (GL), rumination time (RT), number of rumination events (NRE), rumination length (RL), walking time (WT), and idle time (IT). The data were analyzed using univariate and bivariate models in ASReml-SA to estimate the repeatability, heritability, and phenotypic correlations among traits. Results The heritability of GT was estimated to be 0.44 ± 0.23, whereas the other traits had heritability estimates close to zero. The estimated repeatability for all traits was moderate to high, with the highest estimate being for GT (0.70 ± 0.03) and the lowest for RT (0.44 ± 0.03). The intraclass correlation or repeatability at a 1-day interval (i.e., 2 consecutive days) was high for all traits, and steadily reduced when the interval between measurements was longer than 1 week. Discussion The estimated repeatability for the grazing traits showed that wearable sensors and SVM methods are reliable methods for recording sheep activities on pasture, and have a potential application in the ranking of animals for selective breeding.
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