现代生物凝析物与原始相分离隔室的组成比较

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Peptide Science Pub Date : 2023-08-30 DOI:10.1002/pep2.24331
Selene M. C. Cannelli, Ritvik Gupta, Tan Nguyen, Arunava Poddar, Srishti Sharma, Prachiti V. Vithole, Tony Z. Jia
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引用次数: 0

摘要

液-液相分离(LLPS)是一种通常由于带相反电荷的生物聚合物之间的结合而发生的过程,近年来由于其在生物系统中的普遍存在和指导基本细胞过程的能力而受到越来越多的关注。然而,尽管生物学上的这些发现是最近才出现的,但自从Oparin和Haldane首次提出原始LLPS可能是地球上第一批细胞的前身以来,生命起源领域已经对LLPS进行了近100年的研究。从那时起,已经做了大量的工作来阐明可能与原细胞模型相关的不同原始LLPS系统。考虑到原始LLPS和现代无膜细胞器之间的结构相似性,两者之间甚至可能存在进化联系,尽管这仍然是一个有待回答的问题。然而,为了回答这个问题,比较现代生物凝析油和原始LLPS组成方面的资料是必要的。在这里,我们首先关注由内在无序蛋白(IDPs)和核酸组成的无膜细胞器。然后,作为一个平行,我们探索由简单的生物聚合物如短肽和核酸组成的原始无膜室。随后讨论了地球上第一个生物分子可能是如何起源的,分析了可能有利于原始LLPS过程的环境和化学条件。最后,我们直接比较了现代生物凝聚体和原始相分离室的组成,进一步讨论了早期地球上原始IDPs的潜力,以及从无膜细胞到膜结合细胞的进化。这篇综述旨在提供现代和原始相分离结构的成分比较,以帮助这两个领域的研究人员了解当前的知识状态,这种知识是如何演变的,以及当前需要进一步解决的差距。
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A compositional view comparing modern biological condensates and primitive phase‐separated compartment
Liquid–liquid phase separation (LLPS) is a process that often occurs due to binding between oppositely charged biopolymers, and has gained increasing attention recently due to their ubiquity in biological systems and ability to direct essential cellular processes. However, while these discoveries in biology are recent, the field of origins of life has been investigating LLPS for nearly 100 years, ever since the first suggestions by Oparin and Haldane that primitive LLPS could have been precursors to the first cells on Earth. Since then, a significant amount of work has been done to elucidate different primitive LLPS systems that could have been relevant as protocellular models. Given the structural similarities between primitive LLPS and modern membraneless organelles, there may even be an evolutionary link between the two, although this remains a question to be answered. Nevertheless, in order to answer this, a source that compares compositional aspects of modern biological condensates and primitive LLPS is necessary. Here, we first focus on membraneless organelles composed of intrinsically disordered proteins (IDPs) and nucleic acids. Then, as a parallel, we explore primitive membraneless compartments composed of simple biopolymers such as short peptides and nucleic acids. This is followed by a discussion of how the first biomolecules on Earth may have originated, analyzing the environmental and chemical conditions that could have favored primitive LLPS processes. Finally, we directly compare composition of modern biological condensates and primitive phase‐separated compartments, further discussing the potential of primitive IDPs on early Earth, but also the evolution from membraneless to membrane‐bound cells. This review aims to provide a compositional comparison of modern and primitive phase‐separated structures in order to help researchers in both fields understand the current state of knowledge, how this knowledge evolved, and the current gaps that need to be further addressed.
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来源期刊
Peptide Science
Peptide Science Biochemistry, Genetics and Molecular Biology-Biophysics
CiteScore
5.20
自引率
4.20%
发文量
36
期刊介绍: The aim of Peptide Science is to publish significant original research papers and up-to-date reviews covering the entire field of peptide research. Peptide Science provides a forum for papers exploring all aspects of peptide synthesis, materials, structure and bioactivity, including the use of peptides in exploring protein functions and protein-protein interactions. By incorporating both experimental and theoretical studies across the whole spectrum of peptide science, the journal serves the interdisciplinary biochemical, biomaterials, biophysical and biomedical research communities. Peptide Science is the official journal of the American Peptide Society.
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