G. Yıldırım, H. Karakaş, Yaşar Alper Özkaya, Emre Şener, Özge Fındık, Gülhan Naz Pulat
{"title":"在计算机断层扫描图像中检测COVID-19肺炎的人工智能方法的发展","authors":"G. Yıldırım, H. Karakaş, Yaşar Alper Özkaya, Emre Şener, Özge Fındık, Gülhan Naz Pulat","doi":"10.4274/imj.galenos.2023.07348","DOIUrl":null,"url":null,"abstract":"Introduction: This study aimed to construct an artificial intelligence system to detect Coronavirus disease-2019 (COVID-19) pneumonia on computed tomography (CT) images and to test its diagnostic performance. Methods: Data were acquired between March 18-April 17, 2020. CT data of 269 reverse tran-scriptase-polymerase chain reaction proven patients were extracted, and 173 studies (122 for training, 51 testing) were finally used. Most typical lesions of COVID-19 pneumonia were la-beled by two radiologists using a custom tool to generate multiplanar ground-truth masks. Us-ing a patch size of 128x128 pixels, 18,255 axial, 71,458 coronal, and 72,721 sagittal patches were generated to train the datasets with the U-Net network. Lesions were extracted in the or-thogonal planes and filtered by lung segmentation. Sagittal and coronal predicted masks were reconverted to the axial plane and were merged into the intersect-ed axial mask using a voting scheme. Results: Based on the axial predicted masks, the sensitivity and specificity of the model were found as 91.4% and 99.9%, respectively. The total number of positive predictions has increased by 3.9% by the use of intersected predicted masks, whereas the total number of negative predic-tions has only slightly decreased by 0.01%. These changes have resulted in 91.5% sensitivity, 99.9% specificity, and 99.9% accuracy. Conclusion: This study has shown the reliability of the U-Net architecture in diagnosing typical pulmonary lesions of COVID-19 in CT images. It also showed a slightly favorable effect of the intersection method to increase the model's performance. Based on the performance level pre-sented, the model may be used in the rapid and accurate detection and characterization of the typical COVID-19 pneumonia to assist radiologists.","PeriodicalId":42584,"journal":{"name":"Istanbul Medical Journal","volume":" ","pages":""},"PeriodicalIF":0.2000,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Development of an Artificial Intelligence Method to Detect COVID-19 Pneumonia in Computed Tomography Images\",\"authors\":\"G. Yıldırım, H. Karakaş, Yaşar Alper Özkaya, Emre Şener, Özge Fındık, Gülhan Naz Pulat\",\"doi\":\"10.4274/imj.galenos.2023.07348\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Introduction: This study aimed to construct an artificial intelligence system to detect Coronavirus disease-2019 (COVID-19) pneumonia on computed tomography (CT) images and to test its diagnostic performance. Methods: Data were acquired between March 18-April 17, 2020. CT data of 269 reverse tran-scriptase-polymerase chain reaction proven patients were extracted, and 173 studies (122 for training, 51 testing) were finally used. Most typical lesions of COVID-19 pneumonia were la-beled by two radiologists using a custom tool to generate multiplanar ground-truth masks. Us-ing a patch size of 128x128 pixels, 18,255 axial, 71,458 coronal, and 72,721 sagittal patches were generated to train the datasets with the U-Net network. Lesions were extracted in the or-thogonal planes and filtered by lung segmentation. Sagittal and coronal predicted masks were reconverted to the axial plane and were merged into the intersect-ed axial mask using a voting scheme. Results: Based on the axial predicted masks, the sensitivity and specificity of the model were found as 91.4% and 99.9%, respectively. The total number of positive predictions has increased by 3.9% by the use of intersected predicted masks, whereas the total number of negative predic-tions has only slightly decreased by 0.01%. These changes have resulted in 91.5% sensitivity, 99.9% specificity, and 99.9% accuracy. Conclusion: This study has shown the reliability of the U-Net architecture in diagnosing typical pulmonary lesions of COVID-19 in CT images. It also showed a slightly favorable effect of the intersection method to increase the model's performance. Based on the performance level pre-sented, the model may be used in the rapid and accurate detection and characterization of the typical COVID-19 pneumonia to assist radiologists.\",\"PeriodicalId\":42584,\"journal\":{\"name\":\"Istanbul Medical Journal\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.2000,\"publicationDate\":\"2023-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Istanbul Medical Journal\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.4274/imj.galenos.2023.07348\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MEDICINE, GENERAL & INTERNAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Istanbul Medical Journal","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4274/imj.galenos.2023.07348","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MEDICINE, GENERAL & INTERNAL","Score":null,"Total":0}
Development of an Artificial Intelligence Method to Detect COVID-19 Pneumonia in Computed Tomography Images
Introduction: This study aimed to construct an artificial intelligence system to detect Coronavirus disease-2019 (COVID-19) pneumonia on computed tomography (CT) images and to test its diagnostic performance. Methods: Data were acquired between March 18-April 17, 2020. CT data of 269 reverse tran-scriptase-polymerase chain reaction proven patients were extracted, and 173 studies (122 for training, 51 testing) were finally used. Most typical lesions of COVID-19 pneumonia were la-beled by two radiologists using a custom tool to generate multiplanar ground-truth masks. Us-ing a patch size of 128x128 pixels, 18,255 axial, 71,458 coronal, and 72,721 sagittal patches were generated to train the datasets with the U-Net network. Lesions were extracted in the or-thogonal planes and filtered by lung segmentation. Sagittal and coronal predicted masks were reconverted to the axial plane and were merged into the intersect-ed axial mask using a voting scheme. Results: Based on the axial predicted masks, the sensitivity and specificity of the model were found as 91.4% and 99.9%, respectively. The total number of positive predictions has increased by 3.9% by the use of intersected predicted masks, whereas the total number of negative predic-tions has only slightly decreased by 0.01%. These changes have resulted in 91.5% sensitivity, 99.9% specificity, and 99.9% accuracy. Conclusion: This study has shown the reliability of the U-Net architecture in diagnosing typical pulmonary lesions of COVID-19 in CT images. It also showed a slightly favorable effect of the intersection method to increase the model's performance. Based on the performance level pre-sented, the model may be used in the rapid and accurate detection and characterization of the typical COVID-19 pneumonia to assist radiologists.