茶树叶片发育过程中萜类生物合成酶编码基因的表达

IF 0.8 4区 生物学 Q4 PLANT SCIENCES Biologia Plantarum Pub Date : 2022-05-26 DOI:10.32615/bp.2021.073
N. Zhan, L. Huang, Z. Wang, J. Zhang, Y. Xie, X. Shang, G. Liu, Z. Wu
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引用次数: 0

摘要

-气相色谱-质谱法;GO -基因本体;羟甲基戊二酰辅酶a合成酶;IPP -磷酸异戊二烯;KEGG -京都基因和基因组百科全书;ME-CPP - 2- c -甲基- d -赤藓糖醇- 2,4-环二磷酸合成酶;MEP - 4-磷酸甲基赤藓糖醇;MVA -甲羟戊酸;RIN - RNA完整性数;RPKM——每百万读每kb的读数;TPS -萜烯合成酶;转录因子。摘要为揭示茶树叶片萜类生物合成的调控机制,对桉树叶片挥发物含量及幼叶和成熟叶转录组数据库进行了分析。结果表明,山梨树幼叶和成熟叶中挥发物含量分别为92种和89种。其中,1,8-桉树脑、β-蒎烯等物质的含量在幼叶和成熟叶中差异显著。从茶树幼叶和成熟叶转录组数据库中共获得99 802个基因,其中18 441个基因在两个发育阶段表现出明显的差异表达。与成熟叶期相比,幼叶期有6 982个上调基因,11 461个下调基因。选择萜类生物合成的关键基因柠檬烯合成酶-10、柠檬烯合成酶-11、月桂烯合成酶-1、α-蒎烯合成酶-2和1,8-桉树脑合成酶-2进行进一步分析,探讨基因调控和遗传转化的机制。通过RT-qPCR验证了关键基因的表达,其表达与RNA-seq数据一致。WRKY、MYB、NAC和bHLH转录因子对上述关键基因均有重要的调控作用。因此,利用靶基因和TFs构建了茶树叶片发育过程中萜类生物合成的调控网络模型。这些结果为了解植物中萜类化合物的生物合成过程提供了理论依据,并为利用基因工程方法利用山核桃中的萜类化合物提供了参考。
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Expression of genes encoding terpenoid biosynthesis enzymes during leaf development of Eucalyptus camaldulensis
- gas chromatography-mass spectrometry; GO - gene ontology; HMGCS - hydroxymethylglutaryl-CoA synthase; IPP - isoprene phosphate; KEGG - Kyoto encyclopedia of genes and genomes; ME-CPP - 2-C-methyl-D-erythritol- 2,4-cyclodiphosphate synthase; MEP - methylerythritol 4-phosphate; MVA - mevalonate; RIN - RNA integrity number; RPKM - reads per kb per million reads; TPS - terpene synthase; TFs - transcription factors. Abstract To reveal the regulation mechanism of terpenoid biosynthesis in the leaves of Eucalyptus camaldulensis , the content of volatiles in eucalyptus leaves and the transcriptome databases of young and mature leaves were analyzed. The results showed that E. camaldulensis contains 92 and 89 kinds of volatile substances in the young and mature leaves, respectively. Among them, the content of 1,8-cineole, β-pinene, and other substances was significantly different in young and mature leaves. A total of 99 802 unigenes were obtained from the transcriptome database of young and mature leaves of E. camaldulensis and 18 441 genes displayed obviously differential expressions during both developmental stages. There were 6 982 up-regulated unigenes and 11 461 down-regulated unigenes in the young leaf stage compared to the mature leaf stage. The key genes for terpenoid biosynthesis, including limonene synthase-10, limonene synthase-11, myrcene synthase-1, α- pinene synthase-2, and 1,8-cineole synthase-2 , were selected for further analysis to explore the mechanism of gene regulation and genetic transformation. The expressions of key genes were validated by RT-qPCR, and their expressions were consistent with RNA-seq data. WRKY, MYB, NAC , and bHLH transcription factors (TFs) displayed important regulatory effects on the above key genes. Thus, a regulatory network model of terpenoid biosynthesis was constructed using target genes and TFs during leaf development in E. camaldulensis . These results provide theoretical evidence for understanding the terpenoid biosynthesis in plants and reference for terpenoids utilization by genetic engineering methods in E. camaldulensis .
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来源期刊
Biologia Plantarum
Biologia Plantarum 生物-植物科学
CiteScore
2.80
自引率
0.00%
发文量
28
审稿时长
3.3 months
期刊介绍: BIOLOGIA PLANTARUM is an international journal for experimental botany. It publishes original scientific papers and brief communications, reviews on specialized topics, and book reviews in plant physiology, plant biochemistry and biophysics, physiological anatomy, ecophysiology, genetics, molecular biology, cell biology, evolution, and pathophysiology. All papers should contribute substantially to the current level of plant science and combine originality with a potential general interest. The journal focuses on model and crop plants, as well as on under-investigated species.
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