生物信息学分析设计多表位多肽疫苗对抗主要利什曼原虫

A. Karimi Rouzbahani, F. Kheirandish, Pejman Hashemzadeh
{"title":"生物信息学分析设计多表位多肽疫苗对抗主要利什曼原虫","authors":"A. Karimi Rouzbahani, F. Kheirandish, Pejman Hashemzadeh","doi":"10.30699/ijmm.16.5.430","DOIUrl":null,"url":null,"abstract":"Background and Aim: Cutaneous leishmaniasis is a significant public health issue worldwide. Cutaneous leishmaniasis is the most prevalent in the world among the different types of leishmaniasis. Currently, available medications have had no discernible influence on the disease's progression. Up to now, there has been no approved cutaneous leishmaniasis vaccine. New developments in vaccination might be a potential way to come up with a vaccination that is successful for the treatment of cutaneous leishmaniasis. Materials and Methods: This research was conducted to learn more about an effective vaccine for Leishmania major , the ailment's primary cause of CL, which was designed using computational methods. Thus, a multiepitope protein was designed by utilizing potential immune system epitopes, including predicted MHC class I, MHC class II, Cytotoxic T lymphocytes, B-cell, and Interferon-gamma epitopes of Cysteine protease b (CPB), Leishmania homologue of activated C kinase (LACK), and Kinetoplastid membrane protein-11 (KMP-11) antigenic proteins. In order to enhance vaccine immunogenicity, two resuscitation-promoting factors of Mycobacterium tuberculosis were used as adjuvants. Final epitopes were matched with suitable linkers to construct the recombinant structure. The physicochemical and immune-based characteristics of the designed vaccine have been forecasted by using different tools. Moreover, homogeneity modeling was performed to obtain a high-quality 3D structure, followed by refinement and validation. Finally, the codon optimization based on E. coli resulted in a higher CAI value and optimal GC content, followed by combining it in the pET-14b cloning vector. Results: Evaluation of the various characteristics of the designed vaccine showed that it is an immunogenic and non-allergenic antigen that can induce immune responses against Leishmania major infection, which could be promising for cutaneous leishmaniasis. Conclusion: Research shows that a recombinant vaccine can be an effective candidate against cutaneous leishmaniasis.","PeriodicalId":14580,"journal":{"name":"Iranian Journal of Medical Microbiology","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Bioinformatics Analysis to Designing a Multi-epitope-based Peptide Vaccine Combat Leishmania major\",\"authors\":\"A. Karimi Rouzbahani, F. Kheirandish, Pejman Hashemzadeh\",\"doi\":\"10.30699/ijmm.16.5.430\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Background and Aim: Cutaneous leishmaniasis is a significant public health issue worldwide. Cutaneous leishmaniasis is the most prevalent in the world among the different types of leishmaniasis. Currently, available medications have had no discernible influence on the disease's progression. Up to now, there has been no approved cutaneous leishmaniasis vaccine. New developments in vaccination might be a potential way to come up with a vaccination that is successful for the treatment of cutaneous leishmaniasis. Materials and Methods: This research was conducted to learn more about an effective vaccine for Leishmania major , the ailment's primary cause of CL, which was designed using computational methods. Thus, a multiepitope protein was designed by utilizing potential immune system epitopes, including predicted MHC class I, MHC class II, Cytotoxic T lymphocytes, B-cell, and Interferon-gamma epitopes of Cysteine protease b (CPB), Leishmania homologue of activated C kinase (LACK), and Kinetoplastid membrane protein-11 (KMP-11) antigenic proteins. In order to enhance vaccine immunogenicity, two resuscitation-promoting factors of Mycobacterium tuberculosis were used as adjuvants. Final epitopes were matched with suitable linkers to construct the recombinant structure. The physicochemical and immune-based characteristics of the designed vaccine have been forecasted by using different tools. Moreover, homogeneity modeling was performed to obtain a high-quality 3D structure, followed by refinement and validation. Finally, the codon optimization based on E. coli resulted in a higher CAI value and optimal GC content, followed by combining it in the pET-14b cloning vector. Results: Evaluation of the various characteristics of the designed vaccine showed that it is an immunogenic and non-allergenic antigen that can induce immune responses against Leishmania major infection, which could be promising for cutaneous leishmaniasis. Conclusion: Research shows that a recombinant vaccine can be an effective candidate against cutaneous leishmaniasis.\",\"PeriodicalId\":14580,\"journal\":{\"name\":\"Iranian Journal of Medical Microbiology\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Iranian Journal of Medical Microbiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.30699/ijmm.16.5.430\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Medicine\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Iranian Journal of Medical Microbiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.30699/ijmm.16.5.430","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 1

摘要

背景与目的:皮肤利什曼病是世界范围内一个重要的公共卫生问题。在世界上不同类型的利什曼病中,皮肤利什曼原虫病最为普遍。目前,可用的药物对疾病的进展没有明显的影响。到目前为止,还没有批准的皮肤利什曼病疫苗。疫苗接种的新进展可能是一种成功治疗皮肤利什曼病的疫苗接种的潜在途径。材料和方法:本研究旨在了解一种针对主要利什曼原虫的有效疫苗,该疫苗是CL的主要病因,该疫苗采用计算方法设计。因此,通过利用潜在的免疫系统表位设计了多表位蛋白,包括半胱氨酸蛋白酶B(CPB)的预测MHC I类、MHC II类、细胞毒性T淋巴细胞、B细胞和干扰素γ表位、激活的C激酶的利什曼原虫同源物(LACK)和运动蛋白膜蛋白-11(KMP-11)抗原蛋白。为了增强疫苗的免疫原性,使用了两种结核分枝杆菌的复苏促进因子作为佐剂。将最终表位与合适的连接子进行匹配以构建重组结构。通过使用不同的工具预测了所设计疫苗的物理化学和免疫特性。此外,进行同质性建模以获得高质量的3D结构,然后进行细化和验证。最后,基于大肠杆菌的密码子优化产生了更高的CAI值和最佳GC含量,然后将其结合到pET-14b克隆载体中。结果:对所设计的疫苗的各种特性的评估表明,它是一种免疫原性和非致敏性抗原,可以诱导对利什曼原虫主要感染的免疫反应,有可能治疗皮肤利什曼病。结论:研究表明,重组疫苗是治疗皮肤利什曼病的有效候选疫苗。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Bioinformatics Analysis to Designing a Multi-epitope-based Peptide Vaccine Combat Leishmania major
Background and Aim: Cutaneous leishmaniasis is a significant public health issue worldwide. Cutaneous leishmaniasis is the most prevalent in the world among the different types of leishmaniasis. Currently, available medications have had no discernible influence on the disease's progression. Up to now, there has been no approved cutaneous leishmaniasis vaccine. New developments in vaccination might be a potential way to come up with a vaccination that is successful for the treatment of cutaneous leishmaniasis. Materials and Methods: This research was conducted to learn more about an effective vaccine for Leishmania major , the ailment's primary cause of CL, which was designed using computational methods. Thus, a multiepitope protein was designed by utilizing potential immune system epitopes, including predicted MHC class I, MHC class II, Cytotoxic T lymphocytes, B-cell, and Interferon-gamma epitopes of Cysteine protease b (CPB), Leishmania homologue of activated C kinase (LACK), and Kinetoplastid membrane protein-11 (KMP-11) antigenic proteins. In order to enhance vaccine immunogenicity, two resuscitation-promoting factors of Mycobacterium tuberculosis were used as adjuvants. Final epitopes were matched with suitable linkers to construct the recombinant structure. The physicochemical and immune-based characteristics of the designed vaccine have been forecasted by using different tools. Moreover, homogeneity modeling was performed to obtain a high-quality 3D structure, followed by refinement and validation. Finally, the codon optimization based on E. coli resulted in a higher CAI value and optimal GC content, followed by combining it in the pET-14b cloning vector. Results: Evaluation of the various characteristics of the designed vaccine showed that it is an immunogenic and non-allergenic antigen that can induce immune responses against Leishmania major infection, which could be promising for cutaneous leishmaniasis. Conclusion: Research shows that a recombinant vaccine can be an effective candidate against cutaneous leishmaniasis.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Iranian Journal of Medical Microbiology
Iranian Journal of Medical Microbiology Medicine-Infectious Diseases
CiteScore
1.60
自引率
0.00%
发文量
70
审稿时长
8 weeks
期刊最新文献
Molecular Epidemiology of Blastocystis spp. Isolates in Bandar Abbas, South of Iran Molecular Detection of Oral Helicobacter pylori and Its Association with Dental Conditions Among Patients with Helicobacter Infection in Baghdad City Qualitative Melissopalynology Analysis, Glucose Oxydase Activity, and Antibacterial Effect of Honey Samples from Different Botanical Origin Antagonistic Activity of Bacteriocin-Producing Lactobacillus Local Isolates Against Select Pathogenic Bacterial Strains Fungal Rhinosinusitis: Study of Risk Factors, Outcome and Utility of Nasal Samples in Its Diagnosis
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1