利用GRA1和GRA7遗传标记区分刚地弓形虫毒株和无毒株的几种酶限制性片段模式

Q3 Agricultural and Biological Sciences HAYATI Journal of Biosciences Pub Date : 2023-04-17 DOI:10.4308/hjb.30.4.725-733
F. Ekawasti, Eko Setyo Purwanto, Farlin Nepho, D. A. Kurniawati, D. Subekti, R. Damayanti, S. Sa’diah, U. Cahyaningsih
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引用次数: 0

摘要

刚地弓形虫的致病性取决于克隆种群衍生的弓形虫类型。对该位点进行了遗传分析,以确定与人类弓形虫病相关的不同弓形虫基因型(菌株I型、II型和III型)。通过对弓形虫位点的遗传研究,已确定与人类弓形虫病相关的几种弓形虫基因型(菌株I型、II型和III型)。本研究发现,PCR-RFLP是一种有效、简便的基因型鉴定方法。本研究采用PCR-RFLP方法对弓形虫RH和BEV分离株进行基因分型。采用Primer3plus设计的密集颗粒遗传标记GRA1和GRA7,提取弓形虫速殖子DNA并进行PCR扩增。扩增物用限制性内切酶消化。利用PCR-RFLP扩增的致密颗粒产物将弓形虫分为两种基因型(强毒株和无毒株)。结果表明,经DdeI、MvaI、HinfI、RsaI和Sau96I酶切的GRA1和gr7基因区RFLP图谱可用于弓形虫毒株和非毒株的鉴定。刚地弓形虫RH和BEV菌株产生的消化产物不同,可作为区分菌株的依据。
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The Patterns of Restriction Fragment of Several Enzymes to Distinguish Toxoplasma gondii Isolates Virulent and Avirulent Strains using GRA1 and GRA7 Genetic Marker
Toxoplasma gondii pathogenicity depends on the type derived from a clonal population. A genetic analysis of the locus has been carried out to determine the different genotypes of T. gondii (strain types I, II, and III) that are associated with human toxoplasmosis. The several genotypes of T. gondii (strain types I, II, and III) that are linked to human toxoplasmosis have been identified through genetic study of the locus. In this investigation, PCR-RFLP was found to be a useful, and simple method genotypic characterization. The objective of this study was to genotyping characterize T. gondii RH and BEV strains isolates by PCR-RFLP using several restriction enzymes. T. gondii tachyzoite DNA was extracted and amplified by PCR using dense granule genetic markers (GRA1 and GRA7) designed with Primer3plus. The amplification were digested using the restriction enzymes. The PCR-RFLP amplified dense granule products was used to classify strains into two genotypes of T. gondii (virulent and avirulent). The results demonstrated that the RFLP patterns of the GRA1 and GRA7 gene area digested by DdeI, MvaI, HinfI, RsaI, and Sau96I enzymes can be used to identify virulent or avirulent strains of T. gondii. Toxoplasma gondii RH and BEV strain produced different digestion product which can be used to distinguished the strains.
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来源期刊
HAYATI Journal of Biosciences
HAYATI Journal of Biosciences Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
1.10
自引率
0.00%
发文量
75
审稿时长
24 weeks
期刊介绍: HAYATI Journal of Biosciences (HAYATI J Biosci) is an international peer-reviewed and open access journal that publishes significant and important research from all area of biosciences fields such as biodiversity, biosystematics, ecology, physiology, behavior, genetics and biotechnology. All life forms, ranging from microbes, fungi, plants, animals, and human, including virus, are covered by HAYATI J Biosci. HAYATI J Biosci published by Department of Biology, Bogor Agricultural University, Indonesia and the Indonesian Society for Biology. We accept submission from all over the world. Our Editorial Board members are prominent and active international researchers in biosciences fields who ensure efficient, fair, and constructive peer-review process. All accepted articles will be published on payment of an article-processing charge, and will be freely available to all readers with worldwide visibility and coverage.
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